Gene : AT5G60400 A. thaliana TAIR10
Genomic Order:  5538 Name:  ? AT5G60400
Secondary Identifier:  ? PAC:19665956
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60400 0.5kb upstream 0.5kb upstream 1523 true Chr5: 24291140-24292662 Arabidopsis thaliana
AT5G60400 0.5kb upstream 0.5kb upstream 500 false Chr5: 24292163-24292662 Arabidopsis thaliana
AT5G60400 0.5kb downstream 0.5kb downstream 1523 true Chr5: 24290640-24292162 Arabidopsis thaliana
AT5G60400 0.5kb downstream 0.5kb downstream 500 false Chr5: 24290640-24291139 Arabidopsis thaliana
AT5G60400 1.0kb upstream 1.0kb upstream 2023 true Chr5: 24291140-24293162 Arabidopsis thaliana
AT5G60400 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24292163-24293162 Arabidopsis thaliana
AT5G60400 1.0kb downstream 1.0kb downstream 2023 true Chr5: 24290140-24292162 Arabidopsis thaliana
AT5G60400 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24290140-24291139 Arabidopsis thaliana
AT5G60400 2.0kb upstream 2.0kb upstream 3023 true Chr5: 24291140-24294162 Arabidopsis thaliana
AT5G60400 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24292163-24294162 Arabidopsis thaliana
AT5G60400 2.0kb downstream 2.0kb downstream 3023 true Chr5: 24289140-24292162 Arabidopsis thaliana
AT5G60400 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24289140-24291139 Arabidopsis thaliana
AT5G60400 5.0kb upstream 5.0kb upstream 6023 true Chr5: 24291140-24297162 Arabidopsis thaliana
AT5G60400 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24292163-24297162 Arabidopsis thaliana
AT5G60400 5.0kb downstream 5.0kb downstream 6023 true Chr5: 24286140-24292162 Arabidopsis thaliana
AT5G60400 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24286140-24291139 Arabidopsis thaliana
AT5G60400 10.0kb upstream 10.0kb upstream 11023 true Chr5: 24291140-24302162 Arabidopsis thaliana
AT5G60400 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24292163-24302162 Arabidopsis thaliana
AT5G60400 10.0kb downstream 10.0kb downstream 11023 true Chr5: 24281140-24292162 Arabidopsis thaliana
AT5G60400 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24281140-24291139 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068718 5270 Rosid View MSA
122371899 5261 Brassicaceae View MSA
123828569 5264 Brassicales-Malvales View MSA
124349184 5266 SBM View MSA
124244724 5268 Malvidae View MSA
123746509 5271 Pentapetalae View MSA
122795065 5272 Eudicot View MSA
122050753 5273 Angiosperm View MSA
121312101 5274 Embryophyte View MSA
123349303 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.853        
cufflinks 21.47       High
cufflinks 6.917        
cufflinks 21.304       High
cufflinks 6.38       Low
cufflinks 17.193        

0 Strain