Gene : AT5G60380 A. thaliana TAIR10
Defline:  (1 of 13) PTHR31589//PTHR31589:SF17 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  5536
Name:  ? AT5G60380 Secondary Identifier:  ? PAC:19671090
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60380 0.5kb upstream 0.5kb upstream 2389 true Chr5: 24285420-24287808 Arabidopsis thaliana
AT5G60380 0.5kb upstream 0.5kb upstream 500 false Chr5: 24285420-24285919 Arabidopsis thaliana
AT5G60380 0.5kb downstream 0.5kb downstream 2389 true Chr5: 24285920-24288308 Arabidopsis thaliana
AT5G60380 0.5kb downstream 0.5kb downstream 500 false Chr5: 24287809-24288308 Arabidopsis thaliana
AT5G60380 1.0kb upstream 1.0kb upstream 2889 true Chr5: 24284920-24287808 Arabidopsis thaliana
AT5G60380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24284920-24285919 Arabidopsis thaliana
AT5G60380 1.0kb downstream 1.0kb downstream 2889 true Chr5: 24285920-24288808 Arabidopsis thaliana
AT5G60380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24287809-24288808 Arabidopsis thaliana
AT5G60380 2.0kb upstream 2.0kb upstream 3889 true Chr5: 24283920-24287808 Arabidopsis thaliana
AT5G60380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24283920-24285919 Arabidopsis thaliana
AT5G60380 2.0kb downstream 2.0kb downstream 3889 true Chr5: 24285920-24289808 Arabidopsis thaliana
AT5G60380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24287809-24289808 Arabidopsis thaliana
AT5G60380 5.0kb upstream 5.0kb upstream 6889 true Chr5: 24280920-24287808 Arabidopsis thaliana
AT5G60380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24280920-24285919 Arabidopsis thaliana
AT5G60380 5.0kb downstream 5.0kb downstream 6889 true Chr5: 24285920-24292808 Arabidopsis thaliana
AT5G60380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24287809-24292808 Arabidopsis thaliana
AT5G60380 10.0kb upstream 10.0kb upstream 11889 true Chr5: 24275920-24287808 Arabidopsis thaliana
AT5G60380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24275920-24285919 Arabidopsis thaliana
AT5G60380 10.0kb downstream 10.0kb downstream 11889 true Chr5: 24285920-24297808 Arabidopsis thaliana
AT5G60380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24287809-24297808 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381411 5261 Brassicaceae View MSA
123803228 5264 Brassicales-Malvales View MSA
124300353 5266 SBM View MSA
124151552 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain