Gene : AT5G60130 A. thaliana TAIR10
Defline:  (1 of 92) PF02362 - B3 DNA binding domain (B3) Genomic Order:  5509
Name:  ? AT5G60130 Secondary Identifier:  ? PAC:19669922
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60130 0.5kb upstream 0.5kb upstream 1794 true Chr5: 24211871-24213664 Arabidopsis thaliana
AT5G60130 0.5kb upstream 0.5kb upstream 500 false Chr5: 24213165-24213664 Arabidopsis thaliana
AT5G60130 0.5kb downstream 0.5kb downstream 1794 true Chr5: 24211371-24213164 Arabidopsis thaliana
AT5G60130 0.5kb downstream 0.5kb downstream 500 false Chr5: 24211371-24211870 Arabidopsis thaliana
AT5G60130 1.0kb upstream 1.0kb upstream 2294 true Chr5: 24211871-24214164 Arabidopsis thaliana
AT5G60130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24213165-24214164 Arabidopsis thaliana
AT5G60130 1.0kb downstream 1.0kb downstream 2294 true Chr5: 24210871-24213164 Arabidopsis thaliana
AT5G60130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24210871-24211870 Arabidopsis thaliana
AT5G60130 2.0kb upstream 2.0kb upstream 3294 true Chr5: 24211871-24215164 Arabidopsis thaliana
AT5G60130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24213165-24215164 Arabidopsis thaliana
AT5G60130 2.0kb downstream 2.0kb downstream 3294 true Chr5: 24209871-24213164 Arabidopsis thaliana
AT5G60130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24209871-24211870 Arabidopsis thaliana
AT5G60130 5.0kb upstream 5.0kb upstream 6294 true Chr5: 24211871-24218164 Arabidopsis thaliana
AT5G60130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24213165-24218164 Arabidopsis thaliana
AT5G60130 5.0kb downstream 5.0kb downstream 6294 true Chr5: 24206871-24213164 Arabidopsis thaliana
AT5G60130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24206871-24211870 Arabidopsis thaliana
AT5G60130 10.0kb upstream 10.0kb upstream 11294 true Chr5: 24211871-24223164 Arabidopsis thaliana
AT5G60130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24213165-24223164 Arabidopsis thaliana
AT5G60130 10.0kb downstream 10.0kb downstream 11294 true Chr5: 24201871-24213164 Arabidopsis thaliana
AT5G60130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24201871-24211870 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375605 5261 Brassicaceae View MSA
123841668 5264 Brassicales-Malvales View MSA
124350666 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.006     Low Low

0 Strain