Gene : AT5G60140 A. thaliana TAIR10
Defline:  (1 of 92) PF02362 - B3 DNA binding domain (B3) Genomic Order:  5510
Name:  ? AT5G60140 Secondary Identifier:  ? PAC:19669195
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60140 0.5kb upstream 0.5kb upstream 1877 true Chr5: 24214077-24215953 Arabidopsis thaliana
AT5G60140 0.5kb upstream 0.5kb upstream 500 false Chr5: 24215454-24215953 Arabidopsis thaliana
AT5G60140 0.5kb downstream 0.5kb downstream 1877 true Chr5: 24213577-24215453 Arabidopsis thaliana
AT5G60140 0.5kb downstream 0.5kb downstream 500 false Chr5: 24213577-24214076 Arabidopsis thaliana
AT5G60140 1.0kb upstream 1.0kb upstream 2377 true Chr5: 24214077-24216453 Arabidopsis thaliana
AT5G60140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24215454-24216453 Arabidopsis thaliana
AT5G60140 1.0kb downstream 1.0kb downstream 2377 true Chr5: 24213077-24215453 Arabidopsis thaliana
AT5G60140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24213077-24214076 Arabidopsis thaliana
AT5G60140 2.0kb upstream 2.0kb upstream 3377 true Chr5: 24214077-24217453 Arabidopsis thaliana
AT5G60140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24215454-24217453 Arabidopsis thaliana
AT5G60140 2.0kb downstream 2.0kb downstream 3377 true Chr5: 24212077-24215453 Arabidopsis thaliana
AT5G60140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24212077-24214076 Arabidopsis thaliana
AT5G60140 5.0kb upstream 5.0kb upstream 6377 true Chr5: 24214077-24220453 Arabidopsis thaliana
AT5G60140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24215454-24220453 Arabidopsis thaliana
AT5G60140 5.0kb downstream 5.0kb downstream 6377 true Chr5: 24209077-24215453 Arabidopsis thaliana
AT5G60140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24209077-24214076 Arabidopsis thaliana
AT5G60140 10.0kb upstream 10.0kb upstream 11377 true Chr5: 24214077-24225453 Arabidopsis thaliana
AT5G60140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24215454-24225453 Arabidopsis thaliana
AT5G60140 10.0kb downstream 10.0kb downstream 11377 true Chr5: 24204077-24215453 Arabidopsis thaliana
AT5G60140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24204077-24214076 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375605 5261 Brassicaceae View MSA
123841668 5264 Brassicales-Malvales View MSA
124350666 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low  
cufflinks 0.43        
cufflinks 0.012     Low Low
cufflinks 0.502        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.841        

0 Strain