Gene : TMO6 A. thaliana TAIR10
Primary Identifier:  ? AT5G60200 Defline:  (1 of 36) PF02701 - Dof domain, zinc finger (zf-Dof)
Genomic Order:  5517 Name:  ? AT5G60200
Secondary Identifier:  ? PAC:19670945
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60200 0.5kb upstream 0.5kb upstream 2049 true Chr5: 24240475-24242523 Arabidopsis thaliana
AT5G60200 0.5kb upstream 0.5kb upstream 500 false Chr5: 24240475-24240974 Arabidopsis thaliana
AT5G60200 0.5kb downstream 0.5kb downstream 2049 true Chr5: 24240975-24243023 Arabidopsis thaliana
AT5G60200 0.5kb downstream 0.5kb downstream 500 false Chr5: 24242524-24243023 Arabidopsis thaliana
AT5G60200 1.0kb upstream 1.0kb upstream 2549 true Chr5: 24239975-24242523 Arabidopsis thaliana
AT5G60200 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24239975-24240974 Arabidopsis thaliana
AT5G60200 1.0kb downstream 1.0kb downstream 2549 true Chr5: 24240975-24243523 Arabidopsis thaliana
AT5G60200 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24242524-24243523 Arabidopsis thaliana
AT5G60200 2.0kb upstream 2.0kb upstream 3549 true Chr5: 24238975-24242523 Arabidopsis thaliana
AT5G60200 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24238975-24240974 Arabidopsis thaliana
AT5G60200 2.0kb downstream 2.0kb downstream 3549 true Chr5: 24240975-24244523 Arabidopsis thaliana
AT5G60200 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24242524-24244523 Arabidopsis thaliana
AT5G60200 5.0kb upstream 5.0kb upstream 6549 true Chr5: 24235975-24242523 Arabidopsis thaliana
AT5G60200 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24235975-24240974 Arabidopsis thaliana
AT5G60200 5.0kb downstream 5.0kb downstream 6549 true Chr5: 24240975-24247523 Arabidopsis thaliana
AT5G60200 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24242524-24247523 Arabidopsis thaliana
AT5G60200 10.0kb upstream 10.0kb upstream 11549 true Chr5: 24230975-24242523 Arabidopsis thaliana
AT5G60200 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24230975-24240974 Arabidopsis thaliana
AT5G60200 10.0kb downstream 10.0kb downstream 11549 true Chr5: 24240975-24252523 Arabidopsis thaliana
AT5G60200 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24242524-24252523 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374568 5261 Brassicaceae View MSA
123800780 5264 Brassicales-Malvales View MSA
124298151 5266 SBM View MSA
124149868 5268 Malvidae View MSA
124067920 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.178        
cufflinks 43.512     High  
cufflinks 3.177        
cufflinks 58.703     High High
cufflinks 2.492       Low
cufflinks 42.719     High  

0 Strain