Gene : NRPC1 A. thaliana TAIR10
Primary Identifier:  ? AT5G60040 Defline:  (1 of 1) K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)
Genomic Order:  5500 Name:  ? AT5G60040
Secondary Identifier:  ? PAC:19673067
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60040 0.5kb upstream 0.5kb upstream 10883 true Chr5: 24172759-24183641 Arabidopsis thaliana
AT5G60040 0.5kb upstream 0.5kb upstream 500 false Chr5: 24172759-24173258 Arabidopsis thaliana
AT5G60040 0.5kb downstream 0.5kb downstream 10883 true Chr5: 24173259-24184141 Arabidopsis thaliana
AT5G60040 0.5kb downstream 0.5kb downstream 500 false Chr5: 24183642-24184141 Arabidopsis thaliana
AT5G60040 1.0kb upstream 1.0kb upstream 11383 true Chr5: 24172259-24183641 Arabidopsis thaliana
AT5G60040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24172259-24173258 Arabidopsis thaliana
AT5G60040 1.0kb downstream 1.0kb downstream 11383 true Chr5: 24173259-24184641 Arabidopsis thaliana
AT5G60040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24183642-24184641 Arabidopsis thaliana
AT5G60040 2.0kb upstream 2.0kb upstream 12383 true Chr5: 24171259-24183641 Arabidopsis thaliana
AT5G60040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24171259-24173258 Arabidopsis thaliana
AT5G60040 2.0kb downstream 2.0kb downstream 12383 true Chr5: 24173259-24185641 Arabidopsis thaliana
AT5G60040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24183642-24185641 Arabidopsis thaliana
AT5G60040 5.0kb upstream 5.0kb upstream 15383 true Chr5: 24168259-24183641 Arabidopsis thaliana
AT5G60040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24168259-24173258 Arabidopsis thaliana
AT5G60040 5.0kb downstream 5.0kb downstream 15383 true Chr5: 24173259-24188641 Arabidopsis thaliana
AT5G60040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24183642-24188641 Arabidopsis thaliana
AT5G60040 10.0kb upstream 10.0kb upstream 20383 true Chr5: 24163259-24183641 Arabidopsis thaliana
AT5G60040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24163259-24173258 Arabidopsis thaliana
AT5G60040 10.0kb downstream 10.0kb downstream 20383 true Chr5: 24173259-24193641 Arabidopsis thaliana
AT5G60040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24183642-24193641 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041213 5273 Angiosperm View MSA
122369640 5261 Brassicaceae View MSA
123831375 5264 Brassicales-Malvales View MSA
124343770 5266 SBM View MSA
124243135 5268 Malvidae View MSA
124067709 5270 Rosid View MSA
123749411 5271 Pentapetalae View MSA
122792408 5272 Eudicot View MSA
121346672 5274 Embryophyte View MSA
123424215 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.816        
cufflinks 1.026        
cufflinks 0.635       Low
cufflinks 1.25       High
cufflinks 0.596       Low
cufflinks 1.203        

0 Strain