Gene : AT5G59980 A. thaliana TAIR10
Defline:  (1 of 1) K03539 - ribonuclease P/MRP protein subunit RPP1 (RPP1, RPP30) Genomic Order:  5494
Name:  ? AT5G59980 Secondary Identifier:  ? PAC:19667681
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59980 0.5kb upstream 0.5kb upstream 3077 true Chr5: 24146707-24149783 Arabidopsis thaliana
AT5G59980 0.5kb upstream 0.5kb upstream 500 false Chr5: 24146707-24147206 Arabidopsis thaliana
AT5G59980 0.5kb downstream 0.5kb downstream 3077 true Chr5: 24147207-24150283 Arabidopsis thaliana
AT5G59980 0.5kb downstream 0.5kb downstream 500 false Chr5: 24149784-24150283 Arabidopsis thaliana
AT5G59980 1.0kb upstream 1.0kb upstream 3577 true Chr5: 24146207-24149783 Arabidopsis thaliana
AT5G59980 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24146207-24147206 Arabidopsis thaliana
AT5G59980 1.0kb downstream 1.0kb downstream 3577 true Chr5: 24147207-24150783 Arabidopsis thaliana
AT5G59980 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24149784-24150783 Arabidopsis thaliana
AT5G59980 2.0kb upstream 2.0kb upstream 4577 true Chr5: 24145207-24149783 Arabidopsis thaliana
AT5G59980 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24145207-24147206 Arabidopsis thaliana
AT5G59980 2.0kb downstream 2.0kb downstream 4577 true Chr5: 24147207-24151783 Arabidopsis thaliana
AT5G59980 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24149784-24151783 Arabidopsis thaliana
AT5G59980 5.0kb upstream 5.0kb upstream 7577 true Chr5: 24142207-24149783 Arabidopsis thaliana
AT5G59980 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24142207-24147206 Arabidopsis thaliana
AT5G59980 5.0kb downstream 5.0kb downstream 7577 true Chr5: 24147207-24154783 Arabidopsis thaliana
AT5G59980 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24149784-24154783 Arabidopsis thaliana
AT5G59980 10.0kb upstream 10.0kb upstream 12577 true Chr5: 24137207-24149783 Arabidopsis thaliana
AT5G59980 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24137207-24147206 Arabidopsis thaliana
AT5G59980 10.0kb downstream 10.0kb downstream 12577 true Chr5: 24147207-24159783 Arabidopsis thaliana
AT5G59980 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24149784-24159783 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370459 5261 Brassicaceae View MSA
123832884 5264 Brassicales-Malvales View MSA
124345807 5266 SBM View MSA
124244425 5268 Malvidae View MSA
124061915 5270 Rosid View MSA
123743808 5271 Pentapetalae View MSA
122793933 5272 Eudicot View MSA
122049297 5273 Angiosperm View MSA
121350359 5274 Embryophyte View MSA
123426490 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.713        
cufflinks 2.936       High
cufflinks 1.515        
cufflinks 2.795        
cufflinks 1.298       Low
cufflinks 2.597        

0 Strain