Gene : AT5G59840 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24073//PTHR24073:SF561 - FAMILY NOT NAMED // GTP-BINDING PROTEIN ARA-3-RELATED Genomic Order:  5479
Name:  ? AT5G59840 Secondary Identifier:  ? PAC:19672447
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59840 0.5kb upstream 0.5kb upstream 2537 true Chr5: 24107215-24109751 Arabidopsis thaliana
AT5G59840 0.5kb upstream 0.5kb upstream 500 false Chr5: 24109252-24109751 Arabidopsis thaliana
AT5G59840 0.5kb downstream 0.5kb downstream 2537 true Chr5: 24106715-24109251 Arabidopsis thaliana
AT5G59840 0.5kb downstream 0.5kb downstream 500 false Chr5: 24106715-24107214 Arabidopsis thaliana
AT5G59840 1.0kb upstream 1.0kb upstream 3037 true Chr5: 24107215-24110251 Arabidopsis thaliana
AT5G59840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24109252-24110251 Arabidopsis thaliana
AT5G59840 1.0kb downstream 1.0kb downstream 3037 true Chr5: 24106215-24109251 Arabidopsis thaliana
AT5G59840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24106215-24107214 Arabidopsis thaliana
AT5G59840 2.0kb upstream 2.0kb upstream 4037 true Chr5: 24107215-24111251 Arabidopsis thaliana
AT5G59840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24109252-24111251 Arabidopsis thaliana
AT5G59840 2.0kb downstream 2.0kb downstream 4037 true Chr5: 24105215-24109251 Arabidopsis thaliana
AT5G59840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24105215-24107214 Arabidopsis thaliana
AT5G59840 5.0kb upstream 5.0kb upstream 7037 true Chr5: 24107215-24114251 Arabidopsis thaliana
AT5G59840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24109252-24114251 Arabidopsis thaliana
AT5G59840 5.0kb downstream 5.0kb downstream 7037 true Chr5: 24102215-24109251 Arabidopsis thaliana
AT5G59840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24102215-24107214 Arabidopsis thaliana
AT5G59840 10.0kb upstream 10.0kb upstream 12037 true Chr5: 24107215-24119251 Arabidopsis thaliana
AT5G59840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24109252-24119251 Arabidopsis thaliana
AT5G59840 10.0kb downstream 10.0kb downstream 12037 true Chr5: 24097215-24109251 Arabidopsis thaliana
AT5G59840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24097215-24107214 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376237 5261 Brassicaceae View MSA
123839908 5264 Brassicales-Malvales View MSA
124351256 5266 SBM View MSA
124253513 5268 Malvidae View MSA
124070106 5270 Rosid View MSA
123750125 5271 Pentapetalae View MSA
122789123 5272 Eudicot View MSA
122050642 5273 Angiosperm View MSA
123429129 5275 Viridiplantae View MSA
121344035 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.002       Low
cufflinks 18.328        
cufflinks 15.658        
cufflinks 20.382       High
cufflinks 15.134        
cufflinks 18.493        

0 Strain