Gene : HTA6 A. thaliana TAIR10
Primary Identifier:  ? AT5G59870 Defline:  (1 of 13) K11251 - histone H2A (H2A)
Genomic Order:  5483 Name:  ? AT5G59870
Secondary Identifier:  ? PAC:19665863
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59870 0.5kb upstream 0.5kb upstream 1340 true Chr5: 24115381-24116720 Arabidopsis thaliana
AT5G59870 0.5kb upstream 0.5kb upstream 500 false Chr5: 24116221-24116720 Arabidopsis thaliana
AT5G59870 0.5kb downstream 0.5kb downstream 1340 true Chr5: 24114881-24116220 Arabidopsis thaliana
AT5G59870 0.5kb downstream 0.5kb downstream 500 false Chr5: 24114881-24115380 Arabidopsis thaliana
AT5G59870 1.0kb upstream 1.0kb upstream 1840 true Chr5: 24115381-24117220 Arabidopsis thaliana
AT5G59870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24116221-24117220 Arabidopsis thaliana
AT5G59870 1.0kb downstream 1.0kb downstream 1840 true Chr5: 24114381-24116220 Arabidopsis thaliana
AT5G59870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24114381-24115380 Arabidopsis thaliana
AT5G59870 2.0kb upstream 2.0kb upstream 2840 true Chr5: 24115381-24118220 Arabidopsis thaliana
AT5G59870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24116221-24118220 Arabidopsis thaliana
AT5G59870 2.0kb downstream 2.0kb downstream 2840 true Chr5: 24113381-24116220 Arabidopsis thaliana
AT5G59870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24113381-24115380 Arabidopsis thaliana
AT5G59870 5.0kb upstream 5.0kb upstream 5840 true Chr5: 24115381-24121220 Arabidopsis thaliana
AT5G59870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24116221-24121220 Arabidopsis thaliana
AT5G59870 5.0kb downstream 5.0kb downstream 5840 true Chr5: 24110381-24116220 Arabidopsis thaliana
AT5G59870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24110381-24115380 Arabidopsis thaliana
AT5G59870 10.0kb upstream 10.0kb upstream 10840 true Chr5: 24115381-24126220 Arabidopsis thaliana
AT5G59870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24116221-24126220 Arabidopsis thaliana
AT5G59870 10.0kb downstream 10.0kb downstream 10840 true Chr5: 24105381-24116220 Arabidopsis thaliana
AT5G59870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24105381-24115380 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380132 5261 Brassicaceae View MSA
123836855 5264 Brassicales-Malvales View MSA
124341930 5266 SBM View MSA
124246725 5268 Malvidae View MSA
124071077 5270 Rosid View MSA
123750361 5271 Pentapetalae View MSA
122788374 5272 Eudicot View MSA
122048599 5273 Angiosperm View MSA
121351397 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.339     High  
cufflinks 55.925     High  
cufflinks 47.844     High  
cufflinks 62.343     High  
cufflinks 32.604     High Low
cufflinks 81.445     High High

0 Strain