Gene : AT5G62960 A. thaliana TAIR10
Genomic Order:  5805 Name:  ? AT5G62960
Secondary Identifier:  ? PAC:19671169
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62960 0.5kb upstream 0.5kb upstream 2860 true Chr5: 25268782-25271641 Arabidopsis thaliana
AT5G62960 0.5kb upstream 0.5kb upstream 500 false Chr5: 25268782-25269281 Arabidopsis thaliana
AT5G62960 0.5kb downstream 0.5kb downstream 2860 true Chr5: 25269282-25272141 Arabidopsis thaliana
AT5G62960 0.5kb downstream 0.5kb downstream 500 false Chr5: 25271642-25272141 Arabidopsis thaliana
AT5G62960 1.0kb upstream 1.0kb upstream 3360 true Chr5: 25268282-25271641 Arabidopsis thaliana
AT5G62960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25268282-25269281 Arabidopsis thaliana
AT5G62960 1.0kb downstream 1.0kb downstream 3360 true Chr5: 25269282-25272641 Arabidopsis thaliana
AT5G62960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25271642-25272641 Arabidopsis thaliana
AT5G62960 2.0kb upstream 2.0kb upstream 4360 true Chr5: 25267282-25271641 Arabidopsis thaliana
AT5G62960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25267282-25269281 Arabidopsis thaliana
AT5G62960 2.0kb downstream 2.0kb downstream 4360 true Chr5: 25269282-25273641 Arabidopsis thaliana
AT5G62960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25271642-25273641 Arabidopsis thaliana
AT5G62960 5.0kb upstream 5.0kb upstream 7360 true Chr5: 25264282-25271641 Arabidopsis thaliana
AT5G62960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25264282-25269281 Arabidopsis thaliana
AT5G62960 5.0kb downstream 5.0kb downstream 7360 true Chr5: 25269282-25276641 Arabidopsis thaliana
AT5G62960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25271642-25276641 Arabidopsis thaliana
AT5G62960 10.0kb upstream 10.0kb upstream 12360 true Chr5: 25259282-25271641 Arabidopsis thaliana
AT5G62960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25259282-25269281 Arabidopsis thaliana
AT5G62960 10.0kb downstream 10.0kb downstream 12360 true Chr5: 25269282-25281641 Arabidopsis thaliana
AT5G62960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25271642-25281641 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041300 5273 Angiosperm View MSA
124068204 5270 Rosid View MSA
122368673 5261 Brassicaceae View MSA
123839727 5264 Brassicales-Malvales View MSA
124343154 5266 SBM View MSA
124237201 5268 Malvidae View MSA
123746993 5271 Pentapetalae View MSA
122792265 5272 Eudicot View MSA
121350549 5274 Embryophyte View MSA
123427576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.008        
cufflinks 59.578     High High
cufflinks 2.106        
cufflinks 40.515     High  
cufflinks 1.675        
cufflinks 47.091     High  

0 Strain