Gene : AT5G62770 A. thaliana TAIR10
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  5786
Name:  ? AT5G62770 Secondary Identifier:  ? PAC:19672340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62770 0.5kb upstream 0.5kb upstream 1613 true Chr5: 25209995-25211607 Arabidopsis thaliana
AT5G62770 0.5kb upstream 0.5kb upstream 500 false Chr5: 25209995-25210494 Arabidopsis thaliana
AT5G62770 0.5kb downstream 0.5kb downstream 1613 true Chr5: 25210495-25212107 Arabidopsis thaliana
AT5G62770 0.5kb downstream 0.5kb downstream 500 false Chr5: 25211608-25212107 Arabidopsis thaliana
AT5G62770 1.0kb upstream 1.0kb upstream 2113 true Chr5: 25209495-25211607 Arabidopsis thaliana
AT5G62770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25209495-25210494 Arabidopsis thaliana
AT5G62770 1.0kb downstream 1.0kb downstream 2113 true Chr5: 25210495-25212607 Arabidopsis thaliana
AT5G62770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25211608-25212607 Arabidopsis thaliana
AT5G62770 2.0kb upstream 2.0kb upstream 3113 true Chr5: 25208495-25211607 Arabidopsis thaliana
AT5G62770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25208495-25210494 Arabidopsis thaliana
AT5G62770 2.0kb downstream 2.0kb downstream 3113 true Chr5: 25210495-25213607 Arabidopsis thaliana
AT5G62770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25211608-25213607 Arabidopsis thaliana
AT5G62770 5.0kb upstream 5.0kb upstream 6113 true Chr5: 25205495-25211607 Arabidopsis thaliana
AT5G62770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25205495-25210494 Arabidopsis thaliana
AT5G62770 5.0kb downstream 5.0kb downstream 6113 true Chr5: 25210495-25216607 Arabidopsis thaliana
AT5G62770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25211608-25216607 Arabidopsis thaliana
AT5G62770 10.0kb upstream 10.0kb upstream 11113 true Chr5: 25200495-25211607 Arabidopsis thaliana
AT5G62770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25200495-25210494 Arabidopsis thaliana
AT5G62770 10.0kb downstream 10.0kb downstream 11113 true Chr5: 25210495-25221607 Arabidopsis thaliana
AT5G62770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25211608-25221607 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367026 5261 Brassicaceae View MSA
123834693 5264 Brassicales-Malvales View MSA
124349281 5266 SBM View MSA
124246091 5268 Malvidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.164        
cufflinks 27.237        
cufflinks 3.6       Low
cufflinks 32.398     High  
cufflinks 5.148        
cufflinks 32.52     High  

0 Strain