Gene : AT5G62620 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11214//PTHR11214:SF119 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 18-RELATED Genomic Order:  5769
Name:  ? AT5G62620 Secondary Identifier:  ? PAC:19668981
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62620 0.5kb upstream 0.5kb upstream 3696 true Chr5: 25136251-25139946 Arabidopsis thaliana
AT5G62620 0.5kb upstream 0.5kb upstream 500 false Chr5: 25136251-25136750 Arabidopsis thaliana
AT5G62620 0.5kb downstream 0.5kb downstream 3696 true Chr5: 25136751-25140446 Arabidopsis thaliana
AT5G62620 0.5kb downstream 0.5kb downstream 500 false Chr5: 25139947-25140446 Arabidopsis thaliana
AT5G62620 1.0kb upstream 1.0kb upstream 4196 true Chr5: 25135751-25139946 Arabidopsis thaliana
AT5G62620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25135751-25136750 Arabidopsis thaliana
AT5G62620 1.0kb downstream 1.0kb downstream 4196 true Chr5: 25136751-25140946 Arabidopsis thaliana
AT5G62620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25139947-25140946 Arabidopsis thaliana
AT5G62620 2.0kb upstream 2.0kb upstream 5196 true Chr5: 25134751-25139946 Arabidopsis thaliana
AT5G62620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25134751-25136750 Arabidopsis thaliana
AT5G62620 2.0kb downstream 2.0kb downstream 5196 true Chr5: 25136751-25141946 Arabidopsis thaliana
AT5G62620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25139947-25141946 Arabidopsis thaliana
AT5G62620 5.0kb upstream 5.0kb upstream 8196 true Chr5: 25131751-25139946 Arabidopsis thaliana
AT5G62620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25131751-25136750 Arabidopsis thaliana
AT5G62620 5.0kb downstream 5.0kb downstream 8196 true Chr5: 25136751-25144946 Arabidopsis thaliana
AT5G62620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25139947-25144946 Arabidopsis thaliana
AT5G62620 10.0kb upstream 10.0kb upstream 13196 true Chr5: 25126751-25139946 Arabidopsis thaliana
AT5G62620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25126751-25136750 Arabidopsis thaliana
AT5G62620 10.0kb downstream 10.0kb downstream 13196 true Chr5: 25136751-25149946 Arabidopsis thaliana
AT5G62620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25139947-25149946 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371753 5261 Brassicaceae View MSA
123827370 5264 Brassicales-Malvales View MSA
124348344 5266 SBM View MSA
124247839 5268 Malvidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.925        
cufflinks 14.32       High
cufflinks 3.807       Low
cufflinks 10.289        
cufflinks 4.567       Low
cufflinks 11.073        

0 Strain