Gene : AT5G62650 A. thaliana TAIR10
Defline:  (1 of 3) PF04278 - Tic22-like family (Tic22) Genomic Order:  5774
Name:  ? AT5G62650 Secondary Identifier:  ? PAC:19669395
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62650 0.5kb upstream 0.5kb upstream 3811 true Chr5: 25152625-25156435 Arabidopsis thaliana
AT5G62650 0.5kb upstream 0.5kb upstream 500 false Chr5: 25155936-25156435 Arabidopsis thaliana
AT5G62650 0.5kb downstream 0.5kb downstream 3811 true Chr5: 25152125-25155935 Arabidopsis thaliana
AT5G62650 0.5kb downstream 0.5kb downstream 500 false Chr5: 25152125-25152624 Arabidopsis thaliana
AT5G62650 1.0kb upstream 1.0kb upstream 4311 true Chr5: 25152625-25156935 Arabidopsis thaliana
AT5G62650 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25155936-25156935 Arabidopsis thaliana
AT5G62650 1.0kb downstream 1.0kb downstream 4311 true Chr5: 25151625-25155935 Arabidopsis thaliana
AT5G62650 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25151625-25152624 Arabidopsis thaliana
AT5G62650 2.0kb upstream 2.0kb upstream 5311 true Chr5: 25152625-25157935 Arabidopsis thaliana
AT5G62650 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25155936-25157935 Arabidopsis thaliana
AT5G62650 2.0kb downstream 2.0kb downstream 5311 true Chr5: 25150625-25155935 Arabidopsis thaliana
AT5G62650 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25150625-25152624 Arabidopsis thaliana
AT5G62650 5.0kb upstream 5.0kb upstream 8311 true Chr5: 25152625-25160935 Arabidopsis thaliana
AT5G62650 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25155936-25160935 Arabidopsis thaliana
AT5G62650 5.0kb downstream 5.0kb downstream 8311 true Chr5: 25147625-25155935 Arabidopsis thaliana
AT5G62650 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25147625-25152624 Arabidopsis thaliana
AT5G62650 10.0kb upstream 10.0kb upstream 13311 true Chr5: 25152625-25165935 Arabidopsis thaliana
AT5G62650 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25155936-25165935 Arabidopsis thaliana
AT5G62650 10.0kb downstream 10.0kb downstream 13311 true Chr5: 25142625-25155935 Arabidopsis thaliana
AT5G62650 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25142625-25152624 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366845 5261 Brassicaceae View MSA
123827689 5264 Brassicales-Malvales View MSA
124340823 5266 SBM View MSA
124240696 5268 Malvidae View MSA
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.828        
cufflinks 4.311        
cufflinks 9.516       High
cufflinks 4.637        
cufflinks 9.741       High
cufflinks 4.492        

0 Strain