Gene : AT5G62570 A. thaliana TAIR10
Defline:  (1 of 8) PF07887 - Calmodulin binding protein-like (Calmodulin_bind) Genomic Order:  5763
Name:  ? AT5G62570 Secondary Identifier:  ? PAC:19670530
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62570 0.5kb upstream 0.5kb upstream 3476 true Chr5: 25113820-25117295 Arabidopsis thaliana
AT5G62570 0.5kb upstream 0.5kb upstream 500 false Chr5: 25113820-25114319 Arabidopsis thaliana
AT5G62570 0.5kb downstream 0.5kb downstream 3476 true Chr5: 25114320-25117795 Arabidopsis thaliana
AT5G62570 0.5kb downstream 0.5kb downstream 500 false Chr5: 25117296-25117795 Arabidopsis thaliana
AT5G62570 1.0kb upstream 1.0kb upstream 3976 true Chr5: 25113320-25117295 Arabidopsis thaliana
AT5G62570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25113320-25114319 Arabidopsis thaliana
AT5G62570 1.0kb downstream 1.0kb downstream 3976 true Chr5: 25114320-25118295 Arabidopsis thaliana
AT5G62570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25117296-25118295 Arabidopsis thaliana
AT5G62570 2.0kb upstream 2.0kb upstream 4976 true Chr5: 25112320-25117295 Arabidopsis thaliana
AT5G62570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25112320-25114319 Arabidopsis thaliana
AT5G62570 2.0kb downstream 2.0kb downstream 4976 true Chr5: 25114320-25119295 Arabidopsis thaliana
AT5G62570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25117296-25119295 Arabidopsis thaliana
AT5G62570 5.0kb upstream 5.0kb upstream 7976 true Chr5: 25109320-25117295 Arabidopsis thaliana
AT5G62570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25109320-25114319 Arabidopsis thaliana
AT5G62570 5.0kb downstream 5.0kb downstream 7976 true Chr5: 25114320-25122295 Arabidopsis thaliana
AT5G62570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25117296-25122295 Arabidopsis thaliana
AT5G62570 10.0kb upstream 10.0kb upstream 12976 true Chr5: 25104320-25117295 Arabidopsis thaliana
AT5G62570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25104320-25114319 Arabidopsis thaliana
AT5G62570 10.0kb downstream 10.0kb downstream 12976 true Chr5: 25114320-25127295 Arabidopsis thaliana
AT5G62570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25117296-25127295 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366506 5261 Brassicaceae View MSA
123837208 5264 Brassicales-Malvales View MSA
124345817 5266 SBM View MSA
124239425 5268 Malvidae View MSA
124064005 5270 Rosid View MSA
123737818 5271 Pentapetalae View MSA
122794778 5272 Eudicot View MSA
122048926 5273 Angiosperm View MSA
121350550 5274 Embryophyte View MSA
123381786 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.601        
cufflinks 39.768     High High
cufflinks 8.991        
cufflinks 21.777        
cufflinks 6.629       Low
cufflinks 28.665        

0 Strain