Gene : CDF1 A. thaliana TAIR10
Primary Identifier:  ? AT5G62430 Defline:  (1 of 1) K16222 - Dof zinc finger protein DOF5.5 (CDF1)
Genomic Order:  5750 Name:  ? AT5G62430
Secondary Identifier:  ? PAC:19667346
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62430 0.5kb upstream 0.5kb upstream 2342 true Chr5: 25069093-25071434 Arabidopsis thaliana
AT5G62430 0.5kb upstream 0.5kb upstream 500 false Chr5: 25070935-25071434 Arabidopsis thaliana
AT5G62430 0.5kb downstream 0.5kb downstream 2342 true Chr5: 25068593-25070934 Arabidopsis thaliana
AT5G62430 0.5kb downstream 0.5kb downstream 500 false Chr5: 25068593-25069092 Arabidopsis thaliana
AT5G62430 1.0kb upstream 1.0kb upstream 2842 true Chr5: 25069093-25071934 Arabidopsis thaliana
AT5G62430 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25070935-25071934 Arabidopsis thaliana
AT5G62430 1.0kb downstream 1.0kb downstream 2842 true Chr5: 25068093-25070934 Arabidopsis thaliana
AT5G62430 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25068093-25069092 Arabidopsis thaliana
AT5G62430 2.0kb upstream 2.0kb upstream 3842 true Chr5: 25069093-25072934 Arabidopsis thaliana
AT5G62430 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25070935-25072934 Arabidopsis thaliana
AT5G62430 2.0kb downstream 2.0kb downstream 3842 true Chr5: 25067093-25070934 Arabidopsis thaliana
AT5G62430 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25067093-25069092 Arabidopsis thaliana
AT5G62430 5.0kb upstream 5.0kb upstream 6842 true Chr5: 25069093-25075934 Arabidopsis thaliana
AT5G62430 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25070935-25075934 Arabidopsis thaliana
AT5G62430 5.0kb downstream 5.0kb downstream 6842 true Chr5: 25064093-25070934 Arabidopsis thaliana
AT5G62430 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25064093-25069092 Arabidopsis thaliana
AT5G62430 10.0kb upstream 10.0kb upstream 11842 true Chr5: 25069093-25080934 Arabidopsis thaliana
AT5G62430 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25070935-25080934 Arabidopsis thaliana
AT5G62430 10.0kb downstream 10.0kb downstream 11842 true Chr5: 25059093-25070934 Arabidopsis thaliana
AT5G62430 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25059093-25069092 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370217 5261 Brassicaceae View MSA
123799918 5264 Brassicales-Malvales View MSA
124297387 5266 SBM View MSA
124149296 5268 Malvidae View MSA
124038369 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.276        
cufflinks 4.855        
cufflinks 3.077       Low
cufflinks 5.507        
cufflinks 3.835        
cufflinks 6.266       High

0 Strain