Gene : SRO5 A. thaliana TAIR10
Primary Identifier:  ? AT5G62520 Defline:  (1 of 2) PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED
Genomic Order:  5758 Name:  ? AT5G62520
Secondary Identifier:  ? PAC:19665656
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62520 0.5kb upstream 0.5kb upstream 2410 true Chr5: 25097498-25099907 Arabidopsis thaliana
AT5G62520 0.5kb upstream 0.5kb upstream 500 false Chr5: 25097498-25097997 Arabidopsis thaliana
AT5G62520 0.5kb downstream 0.5kb downstream 2410 true Chr5: 25097998-25100407 Arabidopsis thaliana
AT5G62520 0.5kb downstream 0.5kb downstream 500 false Chr5: 25099908-25100407 Arabidopsis thaliana
AT5G62520 1.0kb upstream 1.0kb upstream 2910 true Chr5: 25096998-25099907 Arabidopsis thaliana
AT5G62520 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25096998-25097997 Arabidopsis thaliana
AT5G62520 1.0kb downstream 1.0kb downstream 2910 true Chr5: 25097998-25100907 Arabidopsis thaliana
AT5G62520 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25099908-25100907 Arabidopsis thaliana
AT5G62520 2.0kb upstream 2.0kb upstream 3910 true Chr5: 25095998-25099907 Arabidopsis thaliana
AT5G62520 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25095998-25097997 Arabidopsis thaliana
AT5G62520 2.0kb downstream 2.0kb downstream 3910 true Chr5: 25097998-25101907 Arabidopsis thaliana
AT5G62520 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25099908-25101907 Arabidopsis thaliana
AT5G62520 5.0kb upstream 5.0kb upstream 6910 true Chr5: 25092998-25099907 Arabidopsis thaliana
AT5G62520 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25092998-25097997 Arabidopsis thaliana
AT5G62520 5.0kb downstream 5.0kb downstream 6910 true Chr5: 25097998-25104907 Arabidopsis thaliana
AT5G62520 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25099908-25104907 Arabidopsis thaliana
AT5G62520 10.0kb upstream 10.0kb upstream 11910 true Chr5: 25087998-25099907 Arabidopsis thaliana
AT5G62520 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25087998-25097997 Arabidopsis thaliana
AT5G62520 10.0kb downstream 10.0kb downstream 11910 true Chr5: 25097998-25109907 Arabidopsis thaliana
AT5G62520 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25099908-25109907 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377629 5261 Brassicaceae View MSA
123841101 5264 Brassicales-Malvales View MSA
124337621 5266 SBM View MSA
124251006 5268 Malvidae View MSA
124069361 5270 Rosid View MSA
123751460 5271 Pentapetalae View MSA
122786976 5272 Eudicot View MSA
122047704 5273 Angiosperm View MSA
121349325 5274 Embryophyte View MSA
123381278 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.601        
cufflinks 107.913     High High
cufflinks 2.16        
cufflinks 45.951     High  
cufflinks 0.526       Low
cufflinks 89.764     High  

0 Strain