Gene : AT5G62360 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31080//PTHR31080:SF19 - FAMILY NOT NAMED // PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  5743
Name:  ? AT5G62360 Secondary Identifier:  ? PAC:19671625
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62360 0.5kb upstream 0.5kb upstream 1314 true Chr5: 25040149-25041462 Arabidopsis thaliana
AT5G62360 0.5kb upstream 0.5kb upstream 500 false Chr5: 25040149-25040648 Arabidopsis thaliana
AT5G62360 0.5kb downstream 0.5kb downstream 1314 true Chr5: 25040649-25041962 Arabidopsis thaliana
AT5G62360 0.5kb downstream 0.5kb downstream 500 false Chr5: 25041463-25041962 Arabidopsis thaliana
AT5G62360 1.0kb upstream 1.0kb upstream 1814 true Chr5: 25039649-25041462 Arabidopsis thaliana
AT5G62360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25039649-25040648 Arabidopsis thaliana
AT5G62360 1.0kb downstream 1.0kb downstream 1814 true Chr5: 25040649-25042462 Arabidopsis thaliana
AT5G62360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25041463-25042462 Arabidopsis thaliana
AT5G62360 2.0kb upstream 2.0kb upstream 2814 true Chr5: 25038649-25041462 Arabidopsis thaliana
AT5G62360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25038649-25040648 Arabidopsis thaliana
AT5G62360 2.0kb downstream 2.0kb downstream 2814 true Chr5: 25040649-25043462 Arabidopsis thaliana
AT5G62360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25041463-25043462 Arabidopsis thaliana
AT5G62360 5.0kb upstream 5.0kb upstream 5814 true Chr5: 25035649-25041462 Arabidopsis thaliana
AT5G62360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25035649-25040648 Arabidopsis thaliana
AT5G62360 5.0kb downstream 5.0kb downstream 5814 true Chr5: 25040649-25046462 Arabidopsis thaliana
AT5G62360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25041463-25046462 Arabidopsis thaliana
AT5G62360 10.0kb upstream 10.0kb upstream 10814 true Chr5: 25030649-25041462 Arabidopsis thaliana
AT5G62360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25030649-25040648 Arabidopsis thaliana
AT5G62360 10.0kb downstream 10.0kb downstream 10814 true Chr5: 25040649-25051462 Arabidopsis thaliana
AT5G62360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25041463-25051462 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376892 5261 Brassicaceae View MSA
123829833 5264 Brassicales-Malvales View MSA
124349206 5266 SBM View MSA
124242648 5268 Malvidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.611       Low
cufflinks 175.671     High  
cufflinks 43.379     High  
cufflinks 109.553     High  
cufflinks 48.39     High  
cufflinks 179.102     High  

0 Strain