Gene : AT5G62040 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11362//PTHR11362:SF22 - PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN // PROTEIN BROTHER OF FT AND TFL 1 Genomic Order:  5709
Name:  ? AT5G62040 Secondary Identifier:  ? PAC:19665808
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62040 0.5kb upstream 0.5kb upstream 1400 true Chr5: 24922310-24923709 Arabidopsis thaliana
AT5G62040 0.5kb upstream 0.5kb upstream 500 false Chr5: 24922310-24922809 Arabidopsis thaliana
AT5G62040 0.5kb downstream 0.5kb downstream 1400 true Chr5: 24922810-24924209 Arabidopsis thaliana
AT5G62040 0.5kb downstream 0.5kb downstream 500 false Chr5: 24923710-24924209 Arabidopsis thaliana
AT5G62040 1.0kb upstream 1.0kb upstream 1900 true Chr5: 24921810-24923709 Arabidopsis thaliana
AT5G62040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24921810-24922809 Arabidopsis thaliana
AT5G62040 1.0kb downstream 1.0kb downstream 1900 true Chr5: 24922810-24924709 Arabidopsis thaliana
AT5G62040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24923710-24924709 Arabidopsis thaliana
AT5G62040 2.0kb upstream 2.0kb upstream 2900 true Chr5: 24920810-24923709 Arabidopsis thaliana
AT5G62040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24920810-24922809 Arabidopsis thaliana
AT5G62040 2.0kb downstream 2.0kb downstream 2900 true Chr5: 24922810-24925709 Arabidopsis thaliana
AT5G62040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24923710-24925709 Arabidopsis thaliana
AT5G62040 5.0kb upstream 5.0kb upstream 5900 true Chr5: 24917810-24923709 Arabidopsis thaliana
AT5G62040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24917810-24922809 Arabidopsis thaliana
AT5G62040 5.0kb downstream 5.0kb downstream 5900 true Chr5: 24922810-24928709 Arabidopsis thaliana
AT5G62040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24923710-24928709 Arabidopsis thaliana
AT5G62040 10.0kb upstream 10.0kb upstream 10900 true Chr5: 24912810-24923709 Arabidopsis thaliana
AT5G62040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24912810-24922809 Arabidopsis thaliana
AT5G62040 10.0kb downstream 10.0kb downstream 10900 true Chr5: 24922810-24933709 Arabidopsis thaliana
AT5G62040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24923710-24933709 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365060 5261 Brassicaceae View MSA
123828381 5264 Brassicales-Malvales View MSA
124341221 5266 SBM View MSA
124239944 5268 Malvidae View MSA
124065611 5270 Rosid View MSA
123749423 5271 Pentapetalae View MSA
122795363 5272 Eudicot View MSA
122043822 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121348505 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.977        
cufflinks 1.199        
cufflinks 0.153     Low Low
cufflinks 1.052        
cufflinks 0.278        
cufflinks 0.535        

0 Strain