Gene : AT5G61950 A. thaliana TAIR10
Defline:  (1 of 13) PTHR22975:SF9 - F6D8.33-RELATED Genomic Order:  5700
Name:  ? AT5G61950 Secondary Identifier:  ? PAC:19666528
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61950 0.5kb upstream 0.5kb upstream 5028 true Chr5: 24873066-24878093 Arabidopsis thaliana
AT5G61950 0.5kb upstream 0.5kb upstream 500 false Chr5: 24873066-24873565 Arabidopsis thaliana
AT5G61950 0.5kb downstream 0.5kb downstream 5028 true Chr5: 24873566-24878593 Arabidopsis thaliana
AT5G61950 0.5kb downstream 0.5kb downstream 500 false Chr5: 24878094-24878593 Arabidopsis thaliana
AT5G61950 1.0kb upstream 1.0kb upstream 5528 true Chr5: 24872566-24878093 Arabidopsis thaliana
AT5G61950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24872566-24873565 Arabidopsis thaliana
AT5G61950 1.0kb downstream 1.0kb downstream 5528 true Chr5: 24873566-24879093 Arabidopsis thaliana
AT5G61950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24878094-24879093 Arabidopsis thaliana
AT5G61950 2.0kb upstream 2.0kb upstream 6528 true Chr5: 24871566-24878093 Arabidopsis thaliana
AT5G61950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24871566-24873565 Arabidopsis thaliana
AT5G61950 2.0kb downstream 2.0kb downstream 6528 true Chr5: 24873566-24880093 Arabidopsis thaliana
AT5G61950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24878094-24880093 Arabidopsis thaliana
AT5G61950 5.0kb upstream 5.0kb upstream 9528 true Chr5: 24868566-24878093 Arabidopsis thaliana
AT5G61950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24868566-24873565 Arabidopsis thaliana
AT5G61950 5.0kb downstream 5.0kb downstream 9528 true Chr5: 24873566-24883093 Arabidopsis thaliana
AT5G61950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24878094-24883093 Arabidopsis thaliana
AT5G61950 10.0kb upstream 10.0kb upstream 14528 true Chr5: 24863566-24878093 Arabidopsis thaliana
AT5G61950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24863566-24873565 Arabidopsis thaliana
AT5G61950 10.0kb downstream 10.0kb downstream 14528 true Chr5: 24873566-24888093 Arabidopsis thaliana
AT5G61950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24878094-24888093 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380506 5261 Brassicaceae View MSA
123802750 5264 Brassicales-Malvales View MSA
124299918 5266 SBM View MSA
124252136 5268 Malvidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.534       High
cufflinks 1.023        
cufflinks 1.257        
cufflinks 0.987        
cufflinks 1.249        
cufflinks 1.043        

0 Strain