Gene : GUT1 A. thaliana TAIR10
Primary Identifier:  ? AT5G61840 Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED
Genomic Order:  5690 Name:  ? AT5G61840
Secondary Identifier:  ? PAC:19672344
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5980 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61840 0.5kb upstream 0.5kb upstream 3263 true Chr5: 24839178-24842440 Arabidopsis thaliana
AT5G61840 0.5kb upstream 0.5kb upstream 500 false Chr5: 24841941-24842440 Arabidopsis thaliana
AT5G61840 0.5kb downstream 0.5kb downstream 3263 true Chr5: 24838678-24841940 Arabidopsis thaliana
AT5G61840 0.5kb downstream 0.5kb downstream 500 false Chr5: 24838678-24839177 Arabidopsis thaliana
AT5G61840 1.0kb upstream 1.0kb upstream 3763 true Chr5: 24839178-24842940 Arabidopsis thaliana
AT5G61840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24841941-24842940 Arabidopsis thaliana
AT5G61840 1.0kb downstream 1.0kb downstream 3763 true Chr5: 24838178-24841940 Arabidopsis thaliana
AT5G61840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24838178-24839177 Arabidopsis thaliana
AT5G61840 2.0kb upstream 2.0kb upstream 4763 true Chr5: 24839178-24843940 Arabidopsis thaliana
AT5G61840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24841941-24843940 Arabidopsis thaliana
AT5G61840 2.0kb downstream 2.0kb downstream 4763 true Chr5: 24837178-24841940 Arabidopsis thaliana
AT5G61840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24837178-24839177 Arabidopsis thaliana
AT5G61840 5.0kb upstream 5.0kb upstream 7763 true Chr5: 24839178-24846940 Arabidopsis thaliana
AT5G61840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24841941-24846940 Arabidopsis thaliana
AT5G61840 5.0kb downstream 5.0kb downstream 7763 true Chr5: 24834178-24841940 Arabidopsis thaliana
AT5G61840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24834178-24839177 Arabidopsis thaliana
AT5G61840 10.0kb upstream 10.0kb upstream 12763 true Chr5: 24839178-24851940 Arabidopsis thaliana
AT5G61840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24841941-24851940 Arabidopsis thaliana
AT5G61840 10.0kb downstream 10.0kb downstream 12763 true Chr5: 24829178-24841940 Arabidopsis thaliana
AT5G61840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24829178-24839177 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361554 5261 Brassicaceae View MSA
123831717 5264 Brassicales-Malvales View MSA
124343729 5266 SBM View MSA
124242312 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.322        
cufflinks 19.526        
cufflinks 11.23       Low
cufflinks 21.32       High
cufflinks 12.452        
cufflinks 20.667        

0 Strain