Gene : BON1 A. thaliana TAIR10
Primary Identifier:  ? AT5G61900 Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3
Genomic Order:  5696 Name:  ? AT5G61900
Secondary Identifier:  ? PAC:19665532
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61900 0.5kb upstream 0.5kb upstream 4181 true Chr5: 24855661-24859841 Arabidopsis thaliana
AT5G61900 0.5kb upstream 0.5kb upstream 500 false Chr5: 24859342-24859841 Arabidopsis thaliana
AT5G61900 0.5kb downstream 0.5kb downstream 4181 true Chr5: 24855161-24859341 Arabidopsis thaliana
AT5G61900 0.5kb downstream 0.5kb downstream 500 false Chr5: 24855161-24855660 Arabidopsis thaliana
AT5G61900 1.0kb upstream 1.0kb upstream 4681 true Chr5: 24855661-24860341 Arabidopsis thaliana
AT5G61900 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24859342-24860341 Arabidopsis thaliana
AT5G61900 1.0kb downstream 1.0kb downstream 4681 true Chr5: 24854661-24859341 Arabidopsis thaliana
AT5G61900 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24854661-24855660 Arabidopsis thaliana
AT5G61900 2.0kb upstream 2.0kb upstream 5681 true Chr5: 24855661-24861341 Arabidopsis thaliana
AT5G61900 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24859342-24861341 Arabidopsis thaliana
AT5G61900 2.0kb downstream 2.0kb downstream 5681 true Chr5: 24853661-24859341 Arabidopsis thaliana
AT5G61900 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24853661-24855660 Arabidopsis thaliana
AT5G61900 5.0kb upstream 5.0kb upstream 8681 true Chr5: 24855661-24864341 Arabidopsis thaliana
AT5G61900 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24859342-24864341 Arabidopsis thaliana
AT5G61900 5.0kb downstream 5.0kb downstream 8681 true Chr5: 24850661-24859341 Arabidopsis thaliana
AT5G61900 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24850661-24855660 Arabidopsis thaliana
AT5G61900 10.0kb upstream 10.0kb upstream 13681 true Chr5: 24855661-24869341 Arabidopsis thaliana
AT5G61900 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24859342-24869341 Arabidopsis thaliana
AT5G61900 10.0kb downstream 10.0kb downstream 13681 true Chr5: 24845661-24859341 Arabidopsis thaliana
AT5G61900 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24845661-24855660 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361963 5261 Brassicaceae View MSA
123837759 5264 Brassicales-Malvales View MSA
124322350 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low  
cufflinks 0.021     Low  
cufflinks 0.023     Low  
cufflinks 0.027     Low High
cufflinks 0.01     Low Low
cufflinks 0.009     Low Low

0 Strain