Gene : AT5G61520 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23500//PTHR23500:SF30 - FAMILY NOT NAMED // SUGAR TRANSPORT PROTEIN 3 Genomic Order:  5657
Name:  ? AT5G61520 Secondary Identifier:  ? PAC:19671673
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61520 0.5kb upstream 0.5kb upstream 2748 true Chr5: 24739026-24741773 Arabidopsis thaliana
AT5G61520 0.5kb upstream 0.5kb upstream 500 false Chr5: 24741274-24741773 Arabidopsis thaliana
AT5G61520 0.5kb downstream 0.5kb downstream 2748 true Chr5: 24738526-24741273 Arabidopsis thaliana
AT5G61520 0.5kb downstream 0.5kb downstream 500 false Chr5: 24738526-24739025 Arabidopsis thaliana
AT5G61520 1.0kb upstream 1.0kb upstream 3248 true Chr5: 24739026-24742273 Arabidopsis thaliana
AT5G61520 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24741274-24742273 Arabidopsis thaliana
AT5G61520 1.0kb downstream 1.0kb downstream 3248 true Chr5: 24738026-24741273 Arabidopsis thaliana
AT5G61520 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24738026-24739025 Arabidopsis thaliana
AT5G61520 2.0kb upstream 2.0kb upstream 4248 true Chr5: 24739026-24743273 Arabidopsis thaliana
AT5G61520 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24741274-24743273 Arabidopsis thaliana
AT5G61520 2.0kb downstream 2.0kb downstream 4248 true Chr5: 24737026-24741273 Arabidopsis thaliana
AT5G61520 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24737026-24739025 Arabidopsis thaliana
AT5G61520 5.0kb upstream 5.0kb upstream 7248 true Chr5: 24739026-24746273 Arabidopsis thaliana
AT5G61520 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24741274-24746273 Arabidopsis thaliana
AT5G61520 5.0kb downstream 5.0kb downstream 7248 true Chr5: 24734026-24741273 Arabidopsis thaliana
AT5G61520 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24734026-24739025 Arabidopsis thaliana
AT5G61520 10.0kb upstream 10.0kb upstream 12248 true Chr5: 24739026-24751273 Arabidopsis thaliana
AT5G61520 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24741274-24751273 Arabidopsis thaliana
AT5G61520 10.0kb downstream 10.0kb downstream 12248 true Chr5: 24729026-24741273 Arabidopsis thaliana
AT5G61520 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24729026-24739025 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364665 5261 Brassicaceae View MSA
123834308 5264 Brassicales-Malvales View MSA
124342234 5266 SBM View MSA
124237317 5268 Malvidae View MSA
124065824 5270 Rosid View MSA
123742315 5271 Pentapetalae View MSA
122787331 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.336        
cufflinks 0.295     Low  
cufflinks 10.632        
cufflinks 0.559        
cufflinks 12.637        
cufflinks 0.163     Low Low

0 Strain