Gene : RPS28 A. thaliana TAIR10
Primary Identifier:  ? AT5G64140 Defline:  (1 of 3) K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28)
Genomic Order:  5930 Name:  ? AT5G64140
Secondary Identifier:  ? PAC:19665931
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64140 0.5kb upstream 0.5kb upstream 1469 true Chr5: 25667324-25668792 Arabidopsis thaliana
AT5G64140 0.5kb upstream 0.5kb upstream 500 false Chr5: 25668293-25668792 Arabidopsis thaliana
AT5G64140 0.5kb downstream 0.5kb downstream 1469 true Chr5: 25666824-25668292 Arabidopsis thaliana
AT5G64140 0.5kb downstream 0.5kb downstream 500 false Chr5: 25666824-25667323 Arabidopsis thaliana
AT5G64140 1.0kb upstream 1.0kb upstream 1969 true Chr5: 25667324-25669292 Arabidopsis thaliana
AT5G64140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25668293-25669292 Arabidopsis thaliana
AT5G64140 1.0kb downstream 1.0kb downstream 1969 true Chr5: 25666324-25668292 Arabidopsis thaliana
AT5G64140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25666324-25667323 Arabidopsis thaliana
AT5G64140 2.0kb upstream 2.0kb upstream 2969 true Chr5: 25667324-25670292 Arabidopsis thaliana
AT5G64140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25668293-25670292 Arabidopsis thaliana
AT5G64140 2.0kb downstream 2.0kb downstream 2969 true Chr5: 25665324-25668292 Arabidopsis thaliana
AT5G64140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25665324-25667323 Arabidopsis thaliana
AT5G64140 5.0kb upstream 5.0kb upstream 5969 true Chr5: 25667324-25673292 Arabidopsis thaliana
AT5G64140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25668293-25673292 Arabidopsis thaliana
AT5G64140 5.0kb downstream 5.0kb downstream 5969 true Chr5: 25662324-25668292 Arabidopsis thaliana
AT5G64140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25662324-25667323 Arabidopsis thaliana
AT5G64140 10.0kb upstream 10.0kb upstream 10969 true Chr5: 25667324-25678292 Arabidopsis thaliana
AT5G64140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25668293-25678292 Arabidopsis thaliana
AT5G64140 10.0kb downstream 10.0kb downstream 10969 true Chr5: 25657324-25668292 Arabidopsis thaliana
AT5G64140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25657324-25667323 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122378701 5261 Brassicaceae View MSA
123840351 5264 Brassicales-Malvales View MSA
124348472 5266 SBM View MSA
124251279 5268 Malvidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.184     High  
cufflinks 83.314     High  
cufflinks 50.291     High  
cufflinks 88.354     High  
cufflinks 39.313     High Low
cufflinks 97.354     High High

0 Strain