Gene : AT5G64180 A. thaliana TAIR10
Defline:  (1 of 1) PTHR36080:SF1 - DBJ Genomic Order:  5934
Name:  ? AT5G64180 Secondary Identifier:  ? PAC:19667847
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64180 0.5kb upstream 0.5kb upstream 1778 true Chr5: 25676580-25678357 Arabidopsis thaliana
AT5G64180 0.5kb upstream 0.5kb upstream 500 false Chr5: 25676580-25677079 Arabidopsis thaliana
AT5G64180 0.5kb downstream 0.5kb downstream 1778 true Chr5: 25677080-25678857 Arabidopsis thaliana
AT5G64180 0.5kb downstream 0.5kb downstream 500 false Chr5: 25678358-25678857 Arabidopsis thaliana
AT5G64180 1.0kb upstream 1.0kb upstream 2278 true Chr5: 25676080-25678357 Arabidopsis thaliana
AT5G64180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25676080-25677079 Arabidopsis thaliana
AT5G64180 1.0kb downstream 1.0kb downstream 2278 true Chr5: 25677080-25679357 Arabidopsis thaliana
AT5G64180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25678358-25679357 Arabidopsis thaliana
AT5G64180 2.0kb upstream 2.0kb upstream 3278 true Chr5: 25675080-25678357 Arabidopsis thaliana
AT5G64180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25675080-25677079 Arabidopsis thaliana
AT5G64180 2.0kb downstream 2.0kb downstream 3278 true Chr5: 25677080-25680357 Arabidopsis thaliana
AT5G64180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25678358-25680357 Arabidopsis thaliana
AT5G64180 5.0kb upstream 5.0kb upstream 6278 true Chr5: 25672080-25678357 Arabidopsis thaliana
AT5G64180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25672080-25677079 Arabidopsis thaliana
AT5G64180 5.0kb downstream 5.0kb downstream 6278 true Chr5: 25677080-25683357 Arabidopsis thaliana
AT5G64180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25678358-25683357 Arabidopsis thaliana
AT5G64180 10.0kb upstream 10.0kb upstream 11278 true Chr5: 25667080-25678357 Arabidopsis thaliana
AT5G64180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25667080-25677079 Arabidopsis thaliana
AT5G64180 10.0kb downstream 10.0kb downstream 11278 true Chr5: 25677080-25688357 Arabidopsis thaliana
AT5G64180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25678358-25688357 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368464 5261 Brassicaceae View MSA
123839938 5264 Brassicales-Malvales View MSA
124342055 5266 SBM View MSA
124237763 5268 Malvidae View MSA
124066337 5270 Rosid View MSA
123744862 5271 Pentapetalae View MSA
122787183 5272 Eudicot View MSA
122046943 5273 Angiosperm View MSA
121344014 5274 Embryophyte View MSA
123425570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.941       Low
cufflinks 26.202       High
cufflinks 15.452        
cufflinks 24.278        
cufflinks 19.258        
cufflinks 17.136        

0 Strain