Gene : AAP4 A. thaliana TAIR10
Primary Identifier:  ? AT5G63850 Defline:  (1 of 2) PTHR22950//PTHR22950:SF295 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 2
Genomic Order:  5899 Name:  ? AT5G63850
Secondary Identifier:  ? PAC:19668084
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63850 0.5kb upstream 0.5kb upstream 2966 true Chr5: 25550555-25553520 Arabidopsis thaliana
AT5G63850 0.5kb upstream 0.5kb upstream 500 false Chr5: 25550555-25551054 Arabidopsis thaliana
AT5G63850 0.5kb downstream 0.5kb downstream 2966 true Chr5: 25551055-25554020 Arabidopsis thaliana
AT5G63850 0.5kb downstream 0.5kb downstream 500 false Chr5: 25553521-25554020 Arabidopsis thaliana
AT5G63850 1.0kb upstream 1.0kb upstream 3466 true Chr5: 25550055-25553520 Arabidopsis thaliana
AT5G63850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25550055-25551054 Arabidopsis thaliana
AT5G63850 1.0kb downstream 1.0kb downstream 3466 true Chr5: 25551055-25554520 Arabidopsis thaliana
AT5G63850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25553521-25554520 Arabidopsis thaliana
AT5G63850 2.0kb upstream 2.0kb upstream 4466 true Chr5: 25549055-25553520 Arabidopsis thaliana
AT5G63850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25549055-25551054 Arabidopsis thaliana
AT5G63850 2.0kb downstream 2.0kb downstream 4466 true Chr5: 25551055-25555520 Arabidopsis thaliana
AT5G63850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25553521-25555520 Arabidopsis thaliana
AT5G63850 5.0kb upstream 5.0kb upstream 7466 true Chr5: 25546055-25553520 Arabidopsis thaliana
AT5G63850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25546055-25551054 Arabidopsis thaliana
AT5G63850 5.0kb downstream 5.0kb downstream 7466 true Chr5: 25551055-25558520 Arabidopsis thaliana
AT5G63850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25553521-25558520 Arabidopsis thaliana
AT5G63850 10.0kb upstream 10.0kb upstream 12466 true Chr5: 25541055-25553520 Arabidopsis thaliana
AT5G63850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25541055-25551054 Arabidopsis thaliana
AT5G63850 10.0kb downstream 10.0kb downstream 12466 true Chr5: 25551055-25563520 Arabidopsis thaliana
AT5G63850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25553521-25563520 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370243 5261 Brassicaceae View MSA
123799924 5264 Brassicales-Malvales View MSA
124297393 5266 SBM View MSA
124149298 5268 Malvidae View MSA
123875131 5270 Rosid View MSA
123459006 5271 Pentapetalae View MSA
122494402 5272 Eudicot View MSA
122048359 5273 Angiosperm View MSA
121351118 5274 Embryophyte View MSA
123426213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.322        
cufflinks 21.229        
cufflinks 15.433        
cufflinks 33.86     High High
cufflinks 17.084        
cufflinks 27.388        

0 Strain