Gene : AT5G63905 A. thaliana TAIR10
Defline:  (1 of 1) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  5905
Name:  ? AT5G63905 Secondary Identifier:  ? PAC:19669016
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63905 0.5kb upstream 0.5kb upstream 1229 true Chr5: 25570858-25572086 Arabidopsis thaliana
AT5G63905 0.5kb upstream 0.5kb upstream 500 false Chr5: 25571587-25572086 Arabidopsis thaliana
AT5G63905 0.5kb downstream 0.5kb downstream 1229 true Chr5: 25570358-25571586 Arabidopsis thaliana
AT5G63905 0.5kb downstream 0.5kb downstream 500 false Chr5: 25570358-25570857 Arabidopsis thaliana
AT5G63905 1.0kb upstream 1.0kb upstream 1729 true Chr5: 25570858-25572586 Arabidopsis thaliana
AT5G63905 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25571587-25572586 Arabidopsis thaliana
AT5G63905 1.0kb downstream 1.0kb downstream 1729 true Chr5: 25569858-25571586 Arabidopsis thaliana
AT5G63905 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25569858-25570857 Arabidopsis thaliana
AT5G63905 2.0kb upstream 2.0kb upstream 2729 true Chr5: 25570858-25573586 Arabidopsis thaliana
AT5G63905 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25571587-25573586 Arabidopsis thaliana
AT5G63905 2.0kb downstream 2.0kb downstream 2729 true Chr5: 25568858-25571586 Arabidopsis thaliana
AT5G63905 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25568858-25570857 Arabidopsis thaliana
AT5G63905 5.0kb upstream 5.0kb upstream 5729 true Chr5: 25570858-25576586 Arabidopsis thaliana
AT5G63905 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25571587-25576586 Arabidopsis thaliana
AT5G63905 5.0kb downstream 5.0kb downstream 5729 true Chr5: 25565858-25571586 Arabidopsis thaliana
AT5G63905 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25565858-25570857 Arabidopsis thaliana
AT5G63905 10.0kb upstream 10.0kb upstream 10729 true Chr5: 25570858-25581586 Arabidopsis thaliana
AT5G63905 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25571587-25581586 Arabidopsis thaliana
AT5G63905 10.0kb downstream 10.0kb downstream 10729 true Chr5: 25560858-25571586 Arabidopsis thaliana
AT5G63905 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25560858-25570857 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363399 5261 Brassicaceae View MSA
123834833 5264 Brassicales-Malvales View MSA
124344553 5266 SBM View MSA
124240807 5268 Malvidae View MSA
124072896 5270 Rosid View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.886        
cufflinks 20.967        
cufflinks 8.573        
cufflinks 16.123        
cufflinks 8.266        
cufflinks 23.599       High

0 Strain