Gene : AT5G63830 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15555//PTHR15555:SF0 - ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED // ZINC FINGER HIT DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  5897
Name:  ? AT5G63830 Secondary Identifier:  ? PAC:19669901
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63830 0.5kb upstream 0.5kb upstream 1753 true Chr5: 25543550-25545302 Arabidopsis thaliana
AT5G63830 0.5kb upstream 0.5kb upstream 500 false Chr5: 25544803-25545302 Arabidopsis thaliana
AT5G63830 0.5kb downstream 0.5kb downstream 1753 true Chr5: 25543050-25544802 Arabidopsis thaliana
AT5G63830 0.5kb downstream 0.5kb downstream 500 false Chr5: 25543050-25543549 Arabidopsis thaliana
AT5G63830 1.0kb upstream 1.0kb upstream 2253 true Chr5: 25543550-25545802 Arabidopsis thaliana
AT5G63830 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25544803-25545802 Arabidopsis thaliana
AT5G63830 1.0kb downstream 1.0kb downstream 2253 true Chr5: 25542550-25544802 Arabidopsis thaliana
AT5G63830 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25542550-25543549 Arabidopsis thaliana
AT5G63830 2.0kb upstream 2.0kb upstream 3253 true Chr5: 25543550-25546802 Arabidopsis thaliana
AT5G63830 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25544803-25546802 Arabidopsis thaliana
AT5G63830 2.0kb downstream 2.0kb downstream 3253 true Chr5: 25541550-25544802 Arabidopsis thaliana
AT5G63830 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25541550-25543549 Arabidopsis thaliana
AT5G63830 5.0kb upstream 5.0kb upstream 6253 true Chr5: 25543550-25549802 Arabidopsis thaliana
AT5G63830 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25544803-25549802 Arabidopsis thaliana
AT5G63830 5.0kb downstream 5.0kb downstream 6253 true Chr5: 25538550-25544802 Arabidopsis thaliana
AT5G63830 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25538550-25543549 Arabidopsis thaliana
AT5G63830 10.0kb upstream 10.0kb upstream 11253 true Chr5: 25543550-25554802 Arabidopsis thaliana
AT5G63830 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25544803-25554802 Arabidopsis thaliana
AT5G63830 10.0kb downstream 10.0kb downstream 11253 true Chr5: 25533550-25544802 Arabidopsis thaliana
AT5G63830 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25533550-25543549 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373547 5261 Brassicaceae View MSA
123829141 5264 Brassicales-Malvales View MSA
124343845 5266 SBM View MSA
124239168 5268 Malvidae View MSA
124061111 5270 Rosid View MSA
123740559 5271 Pentapetalae View MSA
122788257 5272 Eudicot View MSA
122044009 5273 Angiosperm View MSA
121344053 5274 Embryophyte View MSA
123425257 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.648        
cufflinks 6.912        
cufflinks 3.625       Low
cufflinks 7.241        
cufflinks 3.94       Low
cufflinks 6.523        

0 Strain