Gene : AT5G63630 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24031:SF265 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 25-RELATED Genomic Order:  5877
Name:  ? AT5G63630 Secondary Identifier:  ? PAC:19672295
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63630 0.5kb upstream 0.5kb upstream 4414 true Chr5: 25472598-25477011 Arabidopsis thaliana
AT5G63630 0.5kb upstream 0.5kb upstream 500 false Chr5: 25476512-25477011 Arabidopsis thaliana
AT5G63630 0.5kb downstream 0.5kb downstream 4414 true Chr5: 25472098-25476511 Arabidopsis thaliana
AT5G63630 0.5kb downstream 0.5kb downstream 500 false Chr5: 25472098-25472597 Arabidopsis thaliana
AT5G63630 1.0kb upstream 1.0kb upstream 4914 true Chr5: 25472598-25477511 Arabidopsis thaliana
AT5G63630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25476512-25477511 Arabidopsis thaliana
AT5G63630 1.0kb downstream 1.0kb downstream 4914 true Chr5: 25471598-25476511 Arabidopsis thaliana
AT5G63630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25471598-25472597 Arabidopsis thaliana
AT5G63630 2.0kb upstream 2.0kb upstream 5914 true Chr5: 25472598-25478511 Arabidopsis thaliana
AT5G63630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25476512-25478511 Arabidopsis thaliana
AT5G63630 2.0kb downstream 2.0kb downstream 5914 true Chr5: 25470598-25476511 Arabidopsis thaliana
AT5G63630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25470598-25472597 Arabidopsis thaliana
AT5G63630 5.0kb upstream 5.0kb upstream 8914 true Chr5: 25472598-25481511 Arabidopsis thaliana
AT5G63630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25476512-25481511 Arabidopsis thaliana
AT5G63630 5.0kb downstream 5.0kb downstream 8914 true Chr5: 25467598-25476511 Arabidopsis thaliana
AT5G63630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25467598-25472597 Arabidopsis thaliana
AT5G63630 10.0kb upstream 10.0kb upstream 13914 true Chr5: 25472598-25486511 Arabidopsis thaliana
AT5G63630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25476512-25486511 Arabidopsis thaliana
AT5G63630 10.0kb downstream 10.0kb downstream 13914 true Chr5: 25462598-25476511 Arabidopsis thaliana
AT5G63630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25462598-25472597 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371665 5261 Brassicaceae View MSA
123837362 5264 Brassicales-Malvales View MSA
124340705 5266 SBM View MSA
124254646 5268 Malvidae View MSA
124063521 5270 Rosid View MSA
123738215 5271 Pentapetalae View MSA
122794289 5272 Eudicot View MSA
122047115 5273 Angiosperm View MSA
121350061 5274 Embryophyte View MSA
123424072 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.689        
cufflinks 3.697        
cufflinks 3.821       High
cufflinks 3.434        
cufflinks 3.189       Low
cufflinks 3.206       Low

0 Strain