Gene : GSA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G63570 Defline:  (1 of 2) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase
Genomic Order:  5870 Name:  ? AT5G63570
Secondary Identifier:  ? PAC:19668221
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5188 Arabidopsis thaliana pathologic  
Athaliana PWY-5918 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63570 0.5kb upstream 0.5kb upstream 2467 true Chr5: 25451375-25453841 Arabidopsis thaliana
AT5G63570 0.5kb upstream 0.5kb upstream 500 false Chr5: 25451375-25451874 Arabidopsis thaliana
AT5G63570 0.5kb downstream 0.5kb downstream 2467 true Chr5: 25451875-25454341 Arabidopsis thaliana
AT5G63570 0.5kb downstream 0.5kb downstream 500 false Chr5: 25453842-25454341 Arabidopsis thaliana
AT5G63570 1.0kb upstream 1.0kb upstream 2967 true Chr5: 25450875-25453841 Arabidopsis thaliana
AT5G63570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25450875-25451874 Arabidopsis thaliana
AT5G63570 1.0kb downstream 1.0kb downstream 2967 true Chr5: 25451875-25454841 Arabidopsis thaliana
AT5G63570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25453842-25454841 Arabidopsis thaliana
AT5G63570 2.0kb upstream 2.0kb upstream 3967 true Chr5: 25449875-25453841 Arabidopsis thaliana
AT5G63570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25449875-25451874 Arabidopsis thaliana
AT5G63570 2.0kb downstream 2.0kb downstream 3967 true Chr5: 25451875-25455841 Arabidopsis thaliana
AT5G63570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25453842-25455841 Arabidopsis thaliana
AT5G63570 5.0kb upstream 5.0kb upstream 6967 true Chr5: 25446875-25453841 Arabidopsis thaliana
AT5G63570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25446875-25451874 Arabidopsis thaliana
AT5G63570 5.0kb downstream 5.0kb downstream 6967 true Chr5: 25451875-25458841 Arabidopsis thaliana
AT5G63570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25453842-25458841 Arabidopsis thaliana
AT5G63570 10.0kb upstream 10.0kb upstream 11967 true Chr5: 25441875-25453841 Arabidopsis thaliana
AT5G63570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25441875-25451874 Arabidopsis thaliana
AT5G63570 10.0kb downstream 10.0kb downstream 11967 true Chr5: 25451875-25463841 Arabidopsis thaliana
AT5G63570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25453842-25463841 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367010 5261 Brassicaceae View MSA
123838013 5264 Brassicales-Malvales View MSA
124339096 5266 SBM View MSA
124239994 5268 Malvidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.066     High High
cufflinks 22.248       Low
cufflinks 81.266     High High
cufflinks 23.762        
cufflinks 63.038     High  
cufflinks 27.437        

0 Strain