Gene : AT5G63270 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33159:SF4 - RPM1-INTERACTING PROTEIN 4 FAMILY PROTEIN Genomic Order:  5843
Name:  ? AT5G63270 Secondary Identifier:  ? PAC:19671854
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63270 0.5kb upstream 0.5kb upstream 952 true Chr5: 25365498-25366449 Arabidopsis thaliana
AT5G63270 0.5kb upstream 0.5kb upstream 500 false Chr5: 25365950-25366449 Arabidopsis thaliana
AT5G63270 0.5kb downstream 0.5kb downstream 952 true Chr5: 25364998-25365949 Arabidopsis thaliana
AT5G63270 0.5kb downstream 0.5kb downstream 500 false Chr5: 25364998-25365497 Arabidopsis thaliana
AT5G63270 1.0kb upstream 1.0kb upstream 1452 true Chr5: 25365498-25366949 Arabidopsis thaliana
AT5G63270 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25365950-25366949 Arabidopsis thaliana
AT5G63270 1.0kb downstream 1.0kb downstream 1452 true Chr5: 25364498-25365949 Arabidopsis thaliana
AT5G63270 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25364498-25365497 Arabidopsis thaliana
AT5G63270 2.0kb upstream 2.0kb upstream 2452 true Chr5: 25365498-25367949 Arabidopsis thaliana
AT5G63270 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25365950-25367949 Arabidopsis thaliana
AT5G63270 2.0kb downstream 2.0kb downstream 2452 true Chr5: 25363498-25365949 Arabidopsis thaliana
AT5G63270 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25363498-25365497 Arabidopsis thaliana
AT5G63270 5.0kb upstream 5.0kb upstream 5452 true Chr5: 25365498-25370949 Arabidopsis thaliana
AT5G63270 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25365950-25370949 Arabidopsis thaliana
AT5G63270 5.0kb downstream 5.0kb downstream 5452 true Chr5: 25360498-25365949 Arabidopsis thaliana
AT5G63270 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25360498-25365497 Arabidopsis thaliana
AT5G63270 10.0kb upstream 10.0kb upstream 10452 true Chr5: 25365498-25375949 Arabidopsis thaliana
AT5G63270 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25365950-25375949 Arabidopsis thaliana
AT5G63270 10.0kb downstream 10.0kb downstream 10452 true Chr5: 25355498-25365949 Arabidopsis thaliana
AT5G63270 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25355498-25365497 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370428 5261 Brassicaceae View MSA
123839959 5264 Brassicales-Malvales View MSA
124345918 5266 SBM View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low Low
cufflinks 8.763        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.471        
cufflinks 0.05     Low Low
cufflinks 11.271        

0 Strain