Gene : AT5G65960 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14659:SF1 - ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 Genomic Order:  6134
Name:  ? AT5G65960 Secondary Identifier:  ? PAC:19669139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65960 0.5kb upstream 0.5kb upstream 2600 true Chr5: 26384848-26387447 Arabidopsis thaliana
AT5G65960 0.5kb upstream 0.5kb upstream 500 false Chr5: 26384848-26385347 Arabidopsis thaliana
AT5G65960 0.5kb downstream 0.5kb downstream 2600 true Chr5: 26385348-26387947 Arabidopsis thaliana
AT5G65960 0.5kb downstream 0.5kb downstream 500 false Chr5: 26387448-26387947 Arabidopsis thaliana
AT5G65960 1.0kb upstream 1.0kb upstream 3100 true Chr5: 26384348-26387447 Arabidopsis thaliana
AT5G65960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26384348-26385347 Arabidopsis thaliana
AT5G65960 1.0kb downstream 1.0kb downstream 3100 true Chr5: 26385348-26388447 Arabidopsis thaliana
AT5G65960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26387448-26388447 Arabidopsis thaliana
AT5G65960 2.0kb upstream 2.0kb upstream 4100 true Chr5: 26383348-26387447 Arabidopsis thaliana
AT5G65960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26383348-26385347 Arabidopsis thaliana
AT5G65960 2.0kb downstream 2.0kb downstream 4100 true Chr5: 26385348-26389447 Arabidopsis thaliana
AT5G65960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26387448-26389447 Arabidopsis thaliana
AT5G65960 5.0kb upstream 5.0kb upstream 7100 true Chr5: 26380348-26387447 Arabidopsis thaliana
AT5G65960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26380348-26385347 Arabidopsis thaliana
AT5G65960 5.0kb downstream 5.0kb downstream 7100 true Chr5: 26385348-26392447 Arabidopsis thaliana
AT5G65960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26387448-26392447 Arabidopsis thaliana
AT5G65960 10.0kb upstream 10.0kb upstream 12100 true Chr5: 26375348-26387447 Arabidopsis thaliana
AT5G65960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26375348-26385347 Arabidopsis thaliana
AT5G65960 10.0kb downstream 10.0kb downstream 12100 true Chr5: 26385348-26397447 Arabidopsis thaliana
AT5G65960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26387448-26397447 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344486 5266 SBM View MSA
122362954 5261 Brassicaceae View MSA
123834133 5264 Brassicales-Malvales View MSA
124243516 5268 Malvidae View MSA
124067682 5270 Rosid View MSA
123740476 5271 Pentapetalae View MSA
122792168 5272 Eudicot View MSA
122047585 5273 Angiosperm View MSA
121347157 5274 Embryophyte View MSA
123426154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.653       High
cufflinks 23.975        
cufflinks 24.149        
cufflinks 25.629        
cufflinks 25.167        
cufflinks 21.258       Low

0 Strain