Gene : XTH6 A. thaliana TAIR10
Primary Identifier:  ? AT5G65730 Defline:  (1 of 1) PTHR31062//PTHR31062:SF48 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 6-RELATED
Genomic Order:  6110 Name:  ? AT5G65730
Secondary Identifier:  ? PAC:19666424
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65730 0.5kb upstream 0.5kb upstream 1947 true Chr5: 26298532-26300478 Arabidopsis thaliana
AT5G65730 0.5kb upstream 0.5kb upstream 500 false Chr5: 26298532-26299031 Arabidopsis thaliana
AT5G65730 0.5kb downstream 0.5kb downstream 1947 true Chr5: 26299032-26300978 Arabidopsis thaliana
AT5G65730 0.5kb downstream 0.5kb downstream 500 false Chr5: 26300479-26300978 Arabidopsis thaliana
AT5G65730 1.0kb upstream 1.0kb upstream 2447 true Chr5: 26298032-26300478 Arabidopsis thaliana
AT5G65730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26298032-26299031 Arabidopsis thaliana
AT5G65730 1.0kb downstream 1.0kb downstream 2447 true Chr5: 26299032-26301478 Arabidopsis thaliana
AT5G65730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26300479-26301478 Arabidopsis thaliana
AT5G65730 2.0kb upstream 2.0kb upstream 3447 true Chr5: 26297032-26300478 Arabidopsis thaliana
AT5G65730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26297032-26299031 Arabidopsis thaliana
AT5G65730 2.0kb downstream 2.0kb downstream 3447 true Chr5: 26299032-26302478 Arabidopsis thaliana
AT5G65730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26300479-26302478 Arabidopsis thaliana
AT5G65730 5.0kb upstream 5.0kb upstream 6447 true Chr5: 26294032-26300478 Arabidopsis thaliana
AT5G65730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26294032-26299031 Arabidopsis thaliana
AT5G65730 5.0kb downstream 5.0kb downstream 6447 true Chr5: 26299032-26305478 Arabidopsis thaliana
AT5G65730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26300479-26305478 Arabidopsis thaliana
AT5G65730 10.0kb upstream 10.0kb upstream 11447 true Chr5: 26289032-26300478 Arabidopsis thaliana
AT5G65730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26289032-26299031 Arabidopsis thaliana
AT5G65730 10.0kb downstream 10.0kb downstream 11447 true Chr5: 26299032-26310478 Arabidopsis thaliana
AT5G65730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26300479-26310478 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365516 5261 Brassicaceae View MSA
123836721 5264 Brassicales-Malvales View MSA
124336614 5266 SBM View MSA
124240830 5268 Malvidae View MSA
124050307 5270 Rosid View MSA
123753126 5271 Pentapetalae View MSA
122793763 5272 Eudicot View MSA
122045227 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 115.285     High  
cufflinks 0.209     Low  
cufflinks 78.553     High  
cufflinks 0.253     Low  
cufflinks 69.193     High  
cufflinks 0.032     Low Low

0 Strain