Gene : bHLH093 A. thaliana TAIR10
Primary Identifier:  ? AT5G65640 Defline:  (1 of 2) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED
Genomic Order:  6099 Name:  ? AT5G65640
Secondary Identifier:  ? PAC:19670949
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65640 0.5kb upstream 0.5kb upstream 2530 true Chr5: 26236555-26239084 Arabidopsis thaliana
AT5G65640 0.5kb upstream 0.5kb upstream 500 false Chr5: 26236555-26237054 Arabidopsis thaliana
AT5G65640 0.5kb downstream 0.5kb downstream 2530 true Chr5: 26237055-26239584 Arabidopsis thaliana
AT5G65640 0.5kb downstream 0.5kb downstream 500 false Chr5: 26239085-26239584 Arabidopsis thaliana
AT5G65640 1.0kb upstream 1.0kb upstream 3030 true Chr5: 26236055-26239084 Arabidopsis thaliana
AT5G65640 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26236055-26237054 Arabidopsis thaliana
AT5G65640 1.0kb downstream 1.0kb downstream 3030 true Chr5: 26237055-26240084 Arabidopsis thaliana
AT5G65640 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26239085-26240084 Arabidopsis thaliana
AT5G65640 2.0kb upstream 2.0kb upstream 4030 true Chr5: 26235055-26239084 Arabidopsis thaliana
AT5G65640 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26235055-26237054 Arabidopsis thaliana
AT5G65640 2.0kb downstream 2.0kb downstream 4030 true Chr5: 26237055-26241084 Arabidopsis thaliana
AT5G65640 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26239085-26241084 Arabidopsis thaliana
AT5G65640 5.0kb upstream 5.0kb upstream 7030 true Chr5: 26232055-26239084 Arabidopsis thaliana
AT5G65640 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26232055-26237054 Arabidopsis thaliana
AT5G65640 5.0kb downstream 5.0kb downstream 7030 true Chr5: 26237055-26244084 Arabidopsis thaliana
AT5G65640 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26239085-26244084 Arabidopsis thaliana
AT5G65640 10.0kb upstream 10.0kb upstream 12030 true Chr5: 26227055-26239084 Arabidopsis thaliana
AT5G65640 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26227055-26237054 Arabidopsis thaliana
AT5G65640 10.0kb downstream 10.0kb downstream 12030 true Chr5: 26237055-26249084 Arabidopsis thaliana
AT5G65640 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26239085-26249084 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376641 5261 Brassicaceae View MSA
123835579 5264 Brassicales-Malvales View MSA
124345825 5266 SBM View MSA
124253224 5268 Malvidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.195        
cufflinks 33.769     High  
cufflinks 2.058        
cufflinks 28.916        
cufflinks 1.827        
cufflinks 35.935     High  

0 Strain