Gene : AT5G65530 A. thaliana TAIR10
Defline:  (1 of 2) PTHR27001//PTHR27001:SF105 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  6086
Name:  ? AT5G65530 Secondary Identifier:  ? PAC:19671506
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65530 0.5kb upstream 0.5kb upstream 3015 true Chr5: 26190592-26193606 Arabidopsis thaliana
AT5G65530 0.5kb upstream 0.5kb upstream 500 false Chr5: 26193107-26193606 Arabidopsis thaliana
AT5G65530 0.5kb downstream 0.5kb downstream 3015 true Chr5: 26190092-26193106 Arabidopsis thaliana
AT5G65530 0.5kb downstream 0.5kb downstream 500 false Chr5: 26190092-26190591 Arabidopsis thaliana
AT5G65530 1.0kb upstream 1.0kb upstream 3515 true Chr5: 26190592-26194106 Arabidopsis thaliana
AT5G65530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26193107-26194106 Arabidopsis thaliana
AT5G65530 1.0kb downstream 1.0kb downstream 3515 true Chr5: 26189592-26193106 Arabidopsis thaliana
AT5G65530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26189592-26190591 Arabidopsis thaliana
AT5G65530 2.0kb upstream 2.0kb upstream 4515 true Chr5: 26190592-26195106 Arabidopsis thaliana
AT5G65530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26193107-26195106 Arabidopsis thaliana
AT5G65530 2.0kb downstream 2.0kb downstream 4515 true Chr5: 26188592-26193106 Arabidopsis thaliana
AT5G65530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26188592-26190591 Arabidopsis thaliana
AT5G65530 5.0kb upstream 5.0kb upstream 7515 true Chr5: 26190592-26198106 Arabidopsis thaliana
AT5G65530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26193107-26198106 Arabidopsis thaliana
AT5G65530 5.0kb downstream 5.0kb downstream 7515 true Chr5: 26185592-26193106 Arabidopsis thaliana
AT5G65530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26185592-26190591 Arabidopsis thaliana
AT5G65530 10.0kb upstream 10.0kb upstream 12515 true Chr5: 26190592-26203106 Arabidopsis thaliana
AT5G65530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26193107-26203106 Arabidopsis thaliana
AT5G65530 10.0kb downstream 10.0kb downstream 12515 true Chr5: 26180592-26193106 Arabidopsis thaliana
AT5G65530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26180592-26190591 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368276 5261 Brassicaceae View MSA
123840795 5264 Brassicales-Malvales View MSA
124350781 5266 SBM View MSA
124238413 5268 Malvidae View MSA
124063504 5270 Rosid View MSA
123745294 5271 Pentapetalae View MSA
122793623 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.762        
cufflinks 3.185        
cufflinks 0.228     Low Low
cufflinks 3.861        
cufflinks 0.675        
cufflinks 5.418       High

0 Strain