Gene : CYCD4;1 A. thaliana TAIR10
Primary Identifier:  ? AT5G65420 Defline:  (1 of 2) PTHR10177:SF213 - CYCLIN-D4-1-RELATED
Genomic Order:  6074 Name:  ? AT5G65420
Secondary Identifier:  ? PAC:19668620
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65420 0.5kb upstream 0.5kb upstream 3024 true Chr5: 26141470-26144493 Arabidopsis thaliana
AT5G65420 0.5kb upstream 0.5kb upstream 500 false Chr5: 26143994-26144493 Arabidopsis thaliana
AT5G65420 0.5kb downstream 0.5kb downstream 3024 true Chr5: 26140970-26143993 Arabidopsis thaliana
AT5G65420 0.5kb downstream 0.5kb downstream 500 false Chr5: 26140970-26141469 Arabidopsis thaliana
AT5G65420 1.0kb upstream 1.0kb upstream 3524 true Chr5: 26141470-26144993 Arabidopsis thaliana
AT5G65420 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26143994-26144993 Arabidopsis thaliana
AT5G65420 1.0kb downstream 1.0kb downstream 3524 true Chr5: 26140470-26143993 Arabidopsis thaliana
AT5G65420 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26140470-26141469 Arabidopsis thaliana
AT5G65420 2.0kb upstream 2.0kb upstream 4524 true Chr5: 26141470-26145993 Arabidopsis thaliana
AT5G65420 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26143994-26145993 Arabidopsis thaliana
AT5G65420 2.0kb downstream 2.0kb downstream 4524 true Chr5: 26139470-26143993 Arabidopsis thaliana
AT5G65420 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26139470-26141469 Arabidopsis thaliana
AT5G65420 5.0kb upstream 5.0kb upstream 7524 true Chr5: 26141470-26148993 Arabidopsis thaliana
AT5G65420 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26143994-26148993 Arabidopsis thaliana
AT5G65420 5.0kb downstream 5.0kb downstream 7524 true Chr5: 26136470-26143993 Arabidopsis thaliana
AT5G65420 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26136470-26141469 Arabidopsis thaliana
AT5G65420 10.0kb upstream 10.0kb upstream 12524 true Chr5: 26141470-26153993 Arabidopsis thaliana
AT5G65420 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26143994-26153993 Arabidopsis thaliana
AT5G65420 10.0kb downstream 10.0kb downstream 12524 true Chr5: 26131470-26143993 Arabidopsis thaliana
AT5G65420 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26131470-26141469 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124298895 5266 SBM View MSA
122377732 5261 Brassicaceae View MSA
123801616 5264 Brassicales-Malvales View MSA
124150436 5268 Malvidae View MSA
124071667 5270 Rosid View MSA
123751076 5271 Pentapetalae View MSA
122794898 5272 Eudicot View MSA
122046466 5273 Angiosperm View MSA
121350196 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.573        
cufflinks 1.456        
cufflinks 0.536        
cufflinks 1.37        
cufflinks 0.376       Low
cufflinks 1.699       High

0 Strain