Gene : AT5G65300 A. thaliana TAIR10
Genomic Order:  6062 Name:  ? AT5G65300
Secondary Identifier:  ? PAC:19672896
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65300 0.5kb upstream 0.5kb upstream 1125 true Chr5: 26095147-26096271 Arabidopsis thaliana
AT5G65300 0.5kb upstream 0.5kb upstream 500 false Chr5: 26095772-26096271 Arabidopsis thaliana
AT5G65300 0.5kb downstream 0.5kb downstream 1125 true Chr5: 26094647-26095771 Arabidopsis thaliana
AT5G65300 0.5kb downstream 0.5kb downstream 500 false Chr5: 26094647-26095146 Arabidopsis thaliana
AT5G65300 1.0kb upstream 1.0kb upstream 1625 true Chr5: 26095147-26096771 Arabidopsis thaliana
AT5G65300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26095772-26096771 Arabidopsis thaliana
AT5G65300 1.0kb downstream 1.0kb downstream 1625 true Chr5: 26094147-26095771 Arabidopsis thaliana
AT5G65300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26094147-26095146 Arabidopsis thaliana
AT5G65300 2.0kb upstream 2.0kb upstream 2625 true Chr5: 26095147-26097771 Arabidopsis thaliana
AT5G65300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26095772-26097771 Arabidopsis thaliana
AT5G65300 2.0kb downstream 2.0kb downstream 2625 true Chr5: 26093147-26095771 Arabidopsis thaliana
AT5G65300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26093147-26095146 Arabidopsis thaliana
AT5G65300 5.0kb upstream 5.0kb upstream 5625 true Chr5: 26095147-26100771 Arabidopsis thaliana
AT5G65300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26095772-26100771 Arabidopsis thaliana
AT5G65300 5.0kb downstream 5.0kb downstream 5625 true Chr5: 26090147-26095771 Arabidopsis thaliana
AT5G65300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26090147-26095146 Arabidopsis thaliana
AT5G65300 10.0kb upstream 10.0kb upstream 10625 true Chr5: 26095147-26105771 Arabidopsis thaliana
AT5G65300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26095772-26105771 Arabidopsis thaliana
AT5G65300 10.0kb downstream 10.0kb downstream 10625 true Chr5: 26085147-26095771 Arabidopsis thaliana
AT5G65300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26085147-26095146 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364273 5261 Brassicaceae View MSA
123829426 5264 Brassicales-Malvales View MSA
124351646 5266 SBM View MSA
124253514 5268 Malvidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.329       Low
cufflinks 111.124     High  
cufflinks 19.016        
cufflinks 105.952     High  
cufflinks 6.024       Low
cufflinks 88.885     High  

0 Strain