Gene : TGA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G65210 Defline:  (1 of 2) PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED
Genomic Order:  6052 Name:  ? AT5G65210
Secondary Identifier:  ? PAC:19667916
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65210 0.5kb upstream 0.5kb upstream 3982 true Chr5: 26057123-26061104 Arabidopsis thaliana
AT5G65210 0.5kb upstream 0.5kb upstream 500 false Chr5: 26057123-26057622 Arabidopsis thaliana
AT5G65210 0.5kb downstream 0.5kb downstream 3982 true Chr5: 26057623-26061604 Arabidopsis thaliana
AT5G65210 0.5kb downstream 0.5kb downstream 500 false Chr5: 26061105-26061604 Arabidopsis thaliana
AT5G65210 1.0kb upstream 1.0kb upstream 4482 true Chr5: 26056623-26061104 Arabidopsis thaliana
AT5G65210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26056623-26057622 Arabidopsis thaliana
AT5G65210 1.0kb downstream 1.0kb downstream 4482 true Chr5: 26057623-26062104 Arabidopsis thaliana
AT5G65210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26061105-26062104 Arabidopsis thaliana
AT5G65210 2.0kb upstream 2.0kb upstream 5482 true Chr5: 26055623-26061104 Arabidopsis thaliana
AT5G65210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26055623-26057622 Arabidopsis thaliana
AT5G65210 2.0kb downstream 2.0kb downstream 5482 true Chr5: 26057623-26063104 Arabidopsis thaliana
AT5G65210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26061105-26063104 Arabidopsis thaliana
AT5G65210 5.0kb upstream 5.0kb upstream 8482 true Chr5: 26052623-26061104 Arabidopsis thaliana
AT5G65210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26052623-26057622 Arabidopsis thaliana
AT5G65210 5.0kb downstream 5.0kb downstream 8482 true Chr5: 26057623-26066104 Arabidopsis thaliana
AT5G65210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26061105-26066104 Arabidopsis thaliana
AT5G65210 10.0kb upstream 10.0kb upstream 13482 true Chr5: 26047623-26061104 Arabidopsis thaliana
AT5G65210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26047623-26057622 Arabidopsis thaliana
AT5G65210 10.0kb downstream 10.0kb downstream 13482 true Chr5: 26057623-26071104 Arabidopsis thaliana
AT5G65210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26061105-26071104 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368508 5261 Brassicaceae View MSA
123841519 5264 Brassicales-Malvales View MSA
124336651 5266 SBM View MSA
124237521 5268 Malvidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.266        
cufflinks 5.284        
cufflinks 0.768       Low
cufflinks 7.016       High
cufflinks 0.931        
cufflinks 4.804        

0 Strain