Gene : MYB53 A. thaliana TAIR10
Primary Identifier:  ? AT5G65230 Defline:  (1 of 5) PTHR10641//PTHR10641:SF537 - MYB-LIKE DNA-BINDING PROTEIN MYB // F21H2.9 PROTEIN-RELATED
Genomic Order:  6054 Name:  ? AT5G65230
Secondary Identifier:  ? PAC:19666593
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65230 0.5kb upstream 0.5kb upstream 1863 true Chr5: 26067790-26069652 Arabidopsis thaliana
AT5G65230 0.5kb upstream 0.5kb upstream 500 false Chr5: 26067790-26068289 Arabidopsis thaliana
AT5G65230 0.5kb downstream 0.5kb downstream 1863 true Chr5: 26068290-26070152 Arabidopsis thaliana
AT5G65230 0.5kb downstream 0.5kb downstream 500 false Chr5: 26069653-26070152 Arabidopsis thaliana
AT5G65230 1.0kb upstream 1.0kb upstream 2363 true Chr5: 26067290-26069652 Arabidopsis thaliana
AT5G65230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26067290-26068289 Arabidopsis thaliana
AT5G65230 1.0kb downstream 1.0kb downstream 2363 true Chr5: 26068290-26070652 Arabidopsis thaliana
AT5G65230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26069653-26070652 Arabidopsis thaliana
AT5G65230 2.0kb upstream 2.0kb upstream 3363 true Chr5: 26066290-26069652 Arabidopsis thaliana
AT5G65230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26066290-26068289 Arabidopsis thaliana
AT5G65230 2.0kb downstream 2.0kb downstream 3363 true Chr5: 26068290-26071652 Arabidopsis thaliana
AT5G65230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26069653-26071652 Arabidopsis thaliana
AT5G65230 5.0kb upstream 5.0kb upstream 6363 true Chr5: 26063290-26069652 Arabidopsis thaliana
AT5G65230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26063290-26068289 Arabidopsis thaliana
AT5G65230 5.0kb downstream 5.0kb downstream 6363 true Chr5: 26068290-26074652 Arabidopsis thaliana
AT5G65230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26069653-26074652 Arabidopsis thaliana
AT5G65230 10.0kb upstream 10.0kb upstream 11363 true Chr5: 26058290-26069652 Arabidopsis thaliana
AT5G65230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26058290-26068289 Arabidopsis thaliana
AT5G65230 10.0kb downstream 10.0kb downstream 11363 true Chr5: 26068290-26079652 Arabidopsis thaliana
AT5G65230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26069653-26079652 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363889 5261 Brassicaceae View MSA
123798638 5264 Brassicales-Malvales View MSA
124296247 5266 SBM View MSA
124250352 5268 Malvidae View MSA
124071827 5270 Rosid View MSA
123751213 5271 Pentapetalae View MSA
122792208 5272 Eudicot View MSA
122045229 5273 Angiosperm View MSA
121310421 5274 Embryophyte View MSA
123347909 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.625        
cufflinks 5.001        
cufflinks 0.462        
cufflinks 5.087        
cufflinks 0.38       Low
cufflinks 7.616       High

0 Strain