Gene : AT5G64780 A. thaliana TAIR10
Defline:  Uncharacterised conserved protein UCP009193 Genomic Order:  6002
Name:  ? AT5G64780 Secondary Identifier:  ? PAC:19670376
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64780 0.5kb upstream 0.5kb upstream 2069 true Chr5: 25900559-25902627 Arabidopsis thaliana
AT5G64780 0.5kb upstream 0.5kb upstream 500 false Chr5: 25902128-25902627 Arabidopsis thaliana
AT5G64780 0.5kb downstream 0.5kb downstream 2069 true Chr5: 25900059-25902127 Arabidopsis thaliana
AT5G64780 0.5kb downstream 0.5kb downstream 500 false Chr5: 25900059-25900558 Arabidopsis thaliana
AT5G64780 1.0kb upstream 1.0kb upstream 2569 true Chr5: 25900559-25903127 Arabidopsis thaliana
AT5G64780 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25902128-25903127 Arabidopsis thaliana
AT5G64780 1.0kb downstream 1.0kb downstream 2569 true Chr5: 25899559-25902127 Arabidopsis thaliana
AT5G64780 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25899559-25900558 Arabidopsis thaliana
AT5G64780 2.0kb upstream 2.0kb upstream 3569 true Chr5: 25900559-25904127 Arabidopsis thaliana
AT5G64780 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25902128-25904127 Arabidopsis thaliana
AT5G64780 2.0kb downstream 2.0kb downstream 3569 true Chr5: 25898559-25902127 Arabidopsis thaliana
AT5G64780 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25898559-25900558 Arabidopsis thaliana
AT5G64780 5.0kb upstream 5.0kb upstream 6569 true Chr5: 25900559-25907127 Arabidopsis thaliana
AT5G64780 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25902128-25907127 Arabidopsis thaliana
AT5G64780 5.0kb downstream 5.0kb downstream 6569 true Chr5: 25895559-25902127 Arabidopsis thaliana
AT5G64780 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25895559-25900558 Arabidopsis thaliana
AT5G64780 10.0kb upstream 10.0kb upstream 11569 true Chr5: 25900559-25912127 Arabidopsis thaliana
AT5G64780 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25902128-25912127 Arabidopsis thaliana
AT5G64780 10.0kb downstream 10.0kb downstream 11569 true Chr5: 25890559-25902127 Arabidopsis thaliana
AT5G64780 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25890559-25900558 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362185 5261 Brassicaceae View MSA
123798323 5264 Brassicales-Malvales View MSA
124295978 5266 SBM View MSA
124148266 5268 Malvidae View MSA
124073278 5270 Rosid View MSA
123747414 5271 Pentapetalae View MSA
122796371 5272 Eudicot View MSA
122042623 5273 Angiosperm View MSA
121349599 5274 Embryophyte View MSA
123428775 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.517       High
cufflinks 0.985       Low
cufflinks 1.959        
cufflinks 1.529        
cufflinks 2.026        
cufflinks 1.005       Low

0 Strain