Gene : LIP1 A. thaliana TAIR10
Primary Identifier:  ? AT5G64813 Defline:  (1 of 1) K07933 - Rab-like protein 3 (RABL3)
Genomic Order:  6006 Name:  ? AT5G64813
Secondary Identifier:  ? PAC:19668628
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64813 0.5kb upstream 0.5kb upstream 3118 true Chr5: 25909779-25912896 Arabidopsis thaliana
AT5G64813 0.5kb upstream 0.5kb upstream 500 false Chr5: 25909779-25910278 Arabidopsis thaliana
AT5G64813 0.5kb downstream 0.5kb downstream 3118 true Chr5: 25910279-25913396 Arabidopsis thaliana
AT5G64813 0.5kb downstream 0.5kb downstream 500 false Chr5: 25912897-25913396 Arabidopsis thaliana
AT5G64813 1.0kb upstream 1.0kb upstream 3618 true Chr5: 25909279-25912896 Arabidopsis thaliana
AT5G64813 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25909279-25910278 Arabidopsis thaliana
AT5G64813 1.0kb downstream 1.0kb downstream 3618 true Chr5: 25910279-25913896 Arabidopsis thaliana
AT5G64813 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25912897-25913896 Arabidopsis thaliana
AT5G64813 2.0kb upstream 2.0kb upstream 4618 true Chr5: 25908279-25912896 Arabidopsis thaliana
AT5G64813 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25908279-25910278 Arabidopsis thaliana
AT5G64813 2.0kb downstream 2.0kb downstream 4618 true Chr5: 25910279-25914896 Arabidopsis thaliana
AT5G64813 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25912897-25914896 Arabidopsis thaliana
AT5G64813 5.0kb upstream 5.0kb upstream 7618 true Chr5: 25905279-25912896 Arabidopsis thaliana
AT5G64813 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25905279-25910278 Arabidopsis thaliana
AT5G64813 5.0kb downstream 5.0kb downstream 7618 true Chr5: 25910279-25917896 Arabidopsis thaliana
AT5G64813 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25912897-25917896 Arabidopsis thaliana
AT5G64813 10.0kb upstream 10.0kb upstream 12618 true Chr5: 25900279-25912896 Arabidopsis thaliana
AT5G64813 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25900279-25910278 Arabidopsis thaliana
AT5G64813 10.0kb downstream 10.0kb downstream 12618 true Chr5: 25910279-25922896 Arabidopsis thaliana
AT5G64813 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25912897-25922896 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368116 5261 Brassicaceae View MSA
123828864 5264 Brassicales-Malvales View MSA
124341105 5266 SBM View MSA
124253838 5268 Malvidae View MSA
124064941 5270 Rosid View MSA
123738246 5271 Pentapetalae View MSA
122786291 5272 Eudicot View MSA
122044978 5273 Angiosperm View MSA
121310378 5274 Embryophyte View MSA
123427949 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.923        
cufflinks 19.585        
cufflinks 14.79       Low
cufflinks 21.878        
cufflinks 15.273       Low
cufflinks 22.12       High

0 Strain