Gene : AT5G64650 A. thaliana TAIR10
Defline:  (1 of 3) K02879 - large subunit ribosomal protein L17 (RP-L17, MRPL17, rplQ) Genomic Order:  5988
Name:  ? AT5G64650 Secondary Identifier:  ? PAC:19665485
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64650 0.5kb upstream 0.5kb upstream 1950 true Chr5: 25839360-25841309 Arabidopsis thaliana
AT5G64650 0.5kb upstream 0.5kb upstream 500 false Chr5: 25840810-25841309 Arabidopsis thaliana
AT5G64650 0.5kb downstream 0.5kb downstream 1950 true Chr5: 25838860-25840809 Arabidopsis thaliana
AT5G64650 0.5kb downstream 0.5kb downstream 500 false Chr5: 25838860-25839359 Arabidopsis thaliana
AT5G64650 1.0kb upstream 1.0kb upstream 2450 true Chr5: 25839360-25841809 Arabidopsis thaliana
AT5G64650 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25840810-25841809 Arabidopsis thaliana
AT5G64650 1.0kb downstream 1.0kb downstream 2450 true Chr5: 25838360-25840809 Arabidopsis thaliana
AT5G64650 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25838360-25839359 Arabidopsis thaliana
AT5G64650 2.0kb upstream 2.0kb upstream 3450 true Chr5: 25839360-25842809 Arabidopsis thaliana
AT5G64650 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25840810-25842809 Arabidopsis thaliana
AT5G64650 2.0kb downstream 2.0kb downstream 3450 true Chr5: 25837360-25840809 Arabidopsis thaliana
AT5G64650 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25837360-25839359 Arabidopsis thaliana
AT5G64650 5.0kb upstream 5.0kb upstream 6450 true Chr5: 25839360-25845809 Arabidopsis thaliana
AT5G64650 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25840810-25845809 Arabidopsis thaliana
AT5G64650 5.0kb downstream 5.0kb downstream 6450 true Chr5: 25834360-25840809 Arabidopsis thaliana
AT5G64650 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25834360-25839359 Arabidopsis thaliana
AT5G64650 10.0kb upstream 10.0kb upstream 11450 true Chr5: 25839360-25850809 Arabidopsis thaliana
AT5G64650 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25840810-25850809 Arabidopsis thaliana
AT5G64650 10.0kb downstream 10.0kb downstream 11450 true Chr5: 25829360-25840809 Arabidopsis thaliana
AT5G64650 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25829360-25839359 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378834 5261 Brassicaceae View MSA
123832255 5264 Brassicales-Malvales View MSA
124343042 5266 SBM View MSA
124243000 5268 Malvidae View MSA
124060746 5270 Rosid View MSA
123739029 5271 Pentapetalae View MSA
122790801 5272 Eudicot View MSA
122045514 5273 Angiosperm View MSA
121347003 5274 Embryophyte View MSA
123426570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.182        
cufflinks 10.021        
cufflinks 6.158        
cufflinks 9.655        
cufflinks 5.783       Low
cufflinks 10.275        

0 Strain