Gene : ATCG00630 A. thaliana TAIR10
Defline:  (1 of 1) K02697 - photosystem I subunit IX (psaJ) Genomic Order:  41
Name:  ? ATCG00630 Secondary Identifier:  ? PAC:19638033
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00630 0.5kb upstream 0.5kb upstream 635 true ChrC: 66429-67063 Arabidopsis thaliana
ATCG00630 0.5kb upstream 0.5kb upstream 500 false ChrC: 66429-66928 Arabidopsis thaliana
ATCG00630 0.5kb downstream 0.5kb downstream 635 true ChrC: 66929-67563 Arabidopsis thaliana
ATCG00630 0.5kb downstream 0.5kb downstream 500 false ChrC: 67064-67563 Arabidopsis thaliana
ATCG00630 1.0kb upstream 1.0kb upstream 1135 true ChrC: 65929-67063 Arabidopsis thaliana
ATCG00630 1.0kb upstream 1.0kb upstream 1000 false ChrC: 65929-66928 Arabidopsis thaliana
ATCG00630 1.0kb downstream 1.0kb downstream 1135 true ChrC: 66929-68063 Arabidopsis thaliana
ATCG00630 1.0kb downstream 1.0kb downstream 1000 false ChrC: 67064-68063 Arabidopsis thaliana
ATCG00630 2.0kb upstream 2.0kb upstream 2135 true ChrC: 64929-67063 Arabidopsis thaliana
ATCG00630 2.0kb upstream 2.0kb upstream 2000 false ChrC: 64929-66928 Arabidopsis thaliana
ATCG00630 2.0kb downstream 2.0kb downstream 2135 true ChrC: 66929-69063 Arabidopsis thaliana
ATCG00630 2.0kb downstream 2.0kb downstream 2000 false ChrC: 67064-69063 Arabidopsis thaliana
ATCG00630 5.0kb upstream 5.0kb upstream 5135 true ChrC: 61929-67063 Arabidopsis thaliana
ATCG00630 5.0kb upstream 5.0kb upstream 5000 false ChrC: 61929-66928 Arabidopsis thaliana
ATCG00630 5.0kb downstream 5.0kb downstream 5135 true ChrC: 66929-72063 Arabidopsis thaliana
ATCG00630 5.0kb downstream 5.0kb downstream 5000 false ChrC: 67064-72063 Arabidopsis thaliana
ATCG00630 10.0kb upstream 10.0kb upstream 10135 true ChrC: 56929-67063 Arabidopsis thaliana
ATCG00630 10.0kb upstream 10.0kb upstream 10000 false ChrC: 56929-66928 Arabidopsis thaliana
ATCG00630 10.0kb downstream 10.0kb downstream 10135 true ChrC: 66929-77063 Arabidopsis thaliana
ATCG00630 10.0kb downstream 10.0kb downstream 10000 false ChrC: 67064-77063 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029213 5273 Angiosperm View MSA
122331545 5261 Brassicaceae Singleton cluster - no MSA
123772711 5264 Brassicales-Malvales Singleton cluster - no MSA
124271219 5266 SBM Singleton cluster - no MSA
124248121 5268 Malvidae View MSA
124039849 5270 Rosid View MSA
123742492 5271 Pentapetalae View MSA
122770300 5272 Eudicot View MSA
121298583 5274 Embryophyte View MSA
123336547 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.351     High  
cufflinks 1.686        
cufflinks 173.33     High High
cufflinks 1.158       Low
cufflinks 58.583     High  
cufflinks 3.616        

0 Strain