Gene : ATCG00640 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15238//PTHR15238:SF3 - FAMILY NOT NAMED // 50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC Genomic Order:  42
Name:  ? ATCG00640 Secondary Identifier:  ? PAC:19637962
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00640 0.5kb upstream 0.5kb upstream 701 true ChrC: 66988-67688 Arabidopsis thaliana
ATCG00640 0.5kb upstream 0.5kb upstream 500 false ChrC: 66988-67487 Arabidopsis thaliana
ATCG00640 0.5kb downstream 0.5kb downstream 701 true ChrC: 67488-68188 Arabidopsis thaliana
ATCG00640 0.5kb downstream 0.5kb downstream 500 false ChrC: 67689-68188 Arabidopsis thaliana
ATCG00640 1.0kb upstream 1.0kb upstream 1201 true ChrC: 66488-67688 Arabidopsis thaliana
ATCG00640 1.0kb upstream 1.0kb upstream 1000 false ChrC: 66488-67487 Arabidopsis thaliana
ATCG00640 1.0kb downstream 1.0kb downstream 1201 true ChrC: 67488-68688 Arabidopsis thaliana
ATCG00640 1.0kb downstream 1.0kb downstream 1000 false ChrC: 67689-68688 Arabidopsis thaliana
ATCG00640 2.0kb upstream 2.0kb upstream 2201 true ChrC: 65488-67688 Arabidopsis thaliana
ATCG00640 2.0kb upstream 2.0kb upstream 2000 false ChrC: 65488-67487 Arabidopsis thaliana
ATCG00640 2.0kb downstream 2.0kb downstream 2201 true ChrC: 67488-69688 Arabidopsis thaliana
ATCG00640 2.0kb downstream 2.0kb downstream 2000 false ChrC: 67689-69688 Arabidopsis thaliana
ATCG00640 5.0kb upstream 5.0kb upstream 5201 true ChrC: 62488-67688 Arabidopsis thaliana
ATCG00640 5.0kb upstream 5.0kb upstream 5000 false ChrC: 62488-67487 Arabidopsis thaliana
ATCG00640 5.0kb downstream 5.0kb downstream 5201 true ChrC: 67488-72688 Arabidopsis thaliana
ATCG00640 5.0kb downstream 5.0kb downstream 5000 false ChrC: 67689-72688 Arabidopsis thaliana
ATCG00640 10.0kb upstream 10.0kb upstream 10201 true ChrC: 57488-67688 Arabidopsis thaliana
ATCG00640 10.0kb upstream 10.0kb upstream 10000 false ChrC: 57488-67487 Arabidopsis thaliana
ATCG00640 10.0kb downstream 10.0kb downstream 10201 true ChrC: 67488-77688 Arabidopsis thaliana
ATCG00640 10.0kb downstream 10.0kb downstream 10000 false ChrC: 67689-77688 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029878 5273 Angiosperm View MSA
122343353 5261 Brassicaceae View MSA
123835452 5264 Brassicales-Malvales View MSA
124340548 5266 SBM View MSA
124249480 5268 Malvidae View MSA
124039179 5270 Rosid View MSA
123753009 5271 Pentapetalae View MSA
122793366 5272 Eudicot View MSA
121299138 5274 Embryophyte View MSA
123428185 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.997        
cufflinks 1.193        
cufflinks 7.389       High
cufflinks 0.581       Low
cufflinks 0.933        
cufflinks 1.009        

0 Strain