Gene : ATCG00650 A. thaliana TAIR10
Defline:  (1 of 1) K02963 - small subunit ribosomal protein S18 (RP-S18, MRPS18, rpsR) Genomic Order:  43
Name:  ? ATCG00650 Secondary Identifier:  ? PAC:19638030
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00650 0.5kb upstream 0.5kb upstream 806 true ChrC: 67417-68222 Arabidopsis thaliana
ATCG00650 0.5kb upstream 0.5kb upstream 500 false ChrC: 67417-67916 Arabidopsis thaliana
ATCG00650 0.5kb downstream 0.5kb downstream 806 true ChrC: 67917-68722 Arabidopsis thaliana
ATCG00650 0.5kb downstream 0.5kb downstream 500 false ChrC: 68223-68722 Arabidopsis thaliana
ATCG00650 1.0kb upstream 1.0kb upstream 1306 true ChrC: 66917-68222 Arabidopsis thaliana
ATCG00650 1.0kb upstream 1.0kb upstream 1000 false ChrC: 66917-67916 Arabidopsis thaliana
ATCG00650 1.0kb downstream 1.0kb downstream 1306 true ChrC: 67917-69222 Arabidopsis thaliana
ATCG00650 1.0kb downstream 1.0kb downstream 1000 false ChrC: 68223-69222 Arabidopsis thaliana
ATCG00650 2.0kb upstream 2.0kb upstream 2306 true ChrC: 65917-68222 Arabidopsis thaliana
ATCG00650 2.0kb upstream 2.0kb upstream 2000 false ChrC: 65917-67916 Arabidopsis thaliana
ATCG00650 2.0kb downstream 2.0kb downstream 2306 true ChrC: 67917-70222 Arabidopsis thaliana
ATCG00650 2.0kb downstream 2.0kb downstream 2000 false ChrC: 68223-70222 Arabidopsis thaliana
ATCG00650 5.0kb upstream 5.0kb upstream 5306 true ChrC: 62917-68222 Arabidopsis thaliana
ATCG00650 5.0kb upstream 5.0kb upstream 5000 false ChrC: 62917-67916 Arabidopsis thaliana
ATCG00650 5.0kb downstream 5.0kb downstream 5306 true ChrC: 67917-73222 Arabidopsis thaliana
ATCG00650 5.0kb downstream 5.0kb downstream 5000 false ChrC: 68223-73222 Arabidopsis thaliana
ATCG00650 10.0kb upstream 10.0kb upstream 10306 true ChrC: 57917-68222 Arabidopsis thaliana
ATCG00650 10.0kb upstream 10.0kb upstream 10000 false ChrC: 57917-67916 Arabidopsis thaliana
ATCG00650 10.0kb downstream 10.0kb downstream 10306 true ChrC: 67917-78222 Arabidopsis thaliana
ATCG00650 10.0kb downstream 10.0kb downstream 10000 false ChrC: 68223-78222 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028985 5273 Angiosperm View MSA
122331780 5261 Brassicaceae View MSA
123836091 5264 Brassicales-Malvales View MSA
124338772 5266 SBM View MSA
124245271 5268 Malvidae View MSA
124037325 5270 Rosid View MSA
123748932 5271 Pentapetalae View MSA
122795855 5272 Eudicot View MSA
121351614 5274 Embryophyte View MSA
123382248 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.725        
cufflinks 0.737        
cufflinks 4.336       High
cufflinks 0.767        
cufflinks 0.907        
cufflinks 1.501        

0 Strain