Gene : ATCG00570 A. thaliana TAIR10
Defline:  (1 of 1) K02708 - photosystem II cytochrome b559 subunit beta (psbF) Genomic Order:  37
Name:  ? ATCG00570 Secondary Identifier:  ? PAC:19637979
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00570 0.5kb upstream 0.5kb upstream 620 true ChrC: 63942-64561 Arabidopsis thaliana
ATCG00570 0.5kb upstream 0.5kb upstream 500 false ChrC: 64062-64561 Arabidopsis thaliana
ATCG00570 0.5kb downstream 0.5kb downstream 620 true ChrC: 63442-64061 Arabidopsis thaliana
ATCG00570 0.5kb downstream 0.5kb downstream 500 false ChrC: 63442-63941 Arabidopsis thaliana
ATCG00570 1.0kb upstream 1.0kb upstream 1120 true ChrC: 63942-65061 Arabidopsis thaliana
ATCG00570 1.0kb upstream 1.0kb upstream 1000 false ChrC: 64062-65061 Arabidopsis thaliana
ATCG00570 1.0kb downstream 1.0kb downstream 1120 true ChrC: 62942-64061 Arabidopsis thaliana
ATCG00570 1.0kb downstream 1.0kb downstream 1000 false ChrC: 62942-63941 Arabidopsis thaliana
ATCG00570 2.0kb upstream 2.0kb upstream 2120 true ChrC: 63942-66061 Arabidopsis thaliana
ATCG00570 2.0kb upstream 2.0kb upstream 2000 false ChrC: 64062-66061 Arabidopsis thaliana
ATCG00570 2.0kb downstream 2.0kb downstream 2120 true ChrC: 61942-64061 Arabidopsis thaliana
ATCG00570 2.0kb downstream 2.0kb downstream 2000 false ChrC: 61942-63941 Arabidopsis thaliana
ATCG00570 5.0kb upstream 5.0kb upstream 5120 true ChrC: 63942-69061 Arabidopsis thaliana
ATCG00570 5.0kb upstream 5.0kb upstream 5000 false ChrC: 64062-69061 Arabidopsis thaliana
ATCG00570 5.0kb downstream 5.0kb downstream 5120 true ChrC: 58942-64061 Arabidopsis thaliana
ATCG00570 5.0kb downstream 5.0kb downstream 5000 false ChrC: 58942-63941 Arabidopsis thaliana
ATCG00570 10.0kb upstream 10.0kb upstream 10120 true ChrC: 63942-74061 Arabidopsis thaliana
ATCG00570 10.0kb upstream 10.0kb upstream 10000 false ChrC: 64062-74061 Arabidopsis thaliana
ATCG00570 10.0kb downstream 10.0kb downstream 10120 true ChrC: 53942-64061 Arabidopsis thaliana
ATCG00570 10.0kb downstream 10.0kb downstream 10000 false ChrC: 53942-63941 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029655 5273 Angiosperm View MSA
122331530 5261 Brassicaceae Singleton cluster - no MSA
123772706 5264 Brassicales-Malvales Singleton cluster - no MSA
124271214 5266 SBM Singleton cluster - no MSA
124248117 5268 Malvidae View MSA
124039912 5270 Rosid View MSA
123744825 5271 Pentapetalae View MSA
122771261 5272 Eudicot View MSA
123429025 5275 Viridiplantae View MSA
121298959 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.224     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.177     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain