Gene : ATCG00750 A. thaliana TAIR10
Defline:  (1 of 1) K02948 - small subunit ribosomal protein S11 (RP-S11, MRPS11, rpsK) Genomic Order:  54
Name:  ? ATCG00750 Secondary Identifier:  ? PAC:19638025
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00750 0.5kb upstream 0.5kb upstream 917 true ChrC: 78960-79876 Arabidopsis thaliana
ATCG00750 0.5kb upstream 0.5kb upstream 500 false ChrC: 79377-79876 Arabidopsis thaliana
ATCG00750 0.5kb downstream 0.5kb downstream 917 true ChrC: 78460-79376 Arabidopsis thaliana
ATCG00750 0.5kb downstream 0.5kb downstream 500 false ChrC: 78460-78959 Arabidopsis thaliana
ATCG00750 1.0kb upstream 1.0kb upstream 1417 true ChrC: 78960-80376 Arabidopsis thaliana
ATCG00750 1.0kb upstream 1.0kb upstream 1000 false ChrC: 79377-80376 Arabidopsis thaliana
ATCG00750 1.0kb downstream 1.0kb downstream 1417 true ChrC: 77960-79376 Arabidopsis thaliana
ATCG00750 1.0kb downstream 1.0kb downstream 1000 false ChrC: 77960-78959 Arabidopsis thaliana
ATCG00750 2.0kb upstream 2.0kb upstream 2417 true ChrC: 78960-81376 Arabidopsis thaliana
ATCG00750 2.0kb upstream 2.0kb upstream 2000 false ChrC: 79377-81376 Arabidopsis thaliana
ATCG00750 2.0kb downstream 2.0kb downstream 2417 true ChrC: 76960-79376 Arabidopsis thaliana
ATCG00750 2.0kb downstream 2.0kb downstream 2000 false ChrC: 76960-78959 Arabidopsis thaliana
ATCG00750 5.0kb upstream 5.0kb upstream 5417 true ChrC: 78960-84376 Arabidopsis thaliana
ATCG00750 5.0kb upstream 5.0kb upstream 5000 false ChrC: 79377-84376 Arabidopsis thaliana
ATCG00750 5.0kb downstream 5.0kb downstream 5417 true ChrC: 73960-79376 Arabidopsis thaliana
ATCG00750 5.0kb downstream 5.0kb downstream 5000 false ChrC: 73960-78959 Arabidopsis thaliana
ATCG00750 10.0kb upstream 10.0kb upstream 10417 true ChrC: 78960-89376 Arabidopsis thaliana
ATCG00750 10.0kb upstream 10.0kb upstream 10000 false ChrC: 79377-89376 Arabidopsis thaliana
ATCG00750 10.0kb downstream 10.0kb downstream 10417 true ChrC: 68960-79376 Arabidopsis thaliana
ATCG00750 10.0kb downstream 10.0kb downstream 10000 false ChrC: 68960-78959 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332087 5261 Brassicaceae View MSA
123835364 5264 Brassicales-Malvales View MSA
124322034 5266 SBM View MSA
124249427 5268 Malvidae View MSA
124071530 5270 Rosid View MSA
123751156 5271 Pentapetalae View MSA
122793979 5272 Eudicot View MSA
122049746 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.362        
cufflinks 2.004       Low
cufflinks 14.839       High
cufflinks 2.165        
cufflinks 4.107        
cufflinks 5.742        

0 Strain