Gene : ATCG00760 A. thaliana TAIR10
Defline:  (1 of 2) K02919 - large subunit ribosomal protein L36 (RP-L36, MRPL36, rpmJ) Genomic Order:  55
Name:  ? ATCG00760 Secondary Identifier:  ? PAC:19638007
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00760 0.5kb upstream 0.5kb upstream 614 true ChrC: 79489-80102 Arabidopsis thaliana
ATCG00760 0.5kb upstream 0.5kb upstream 500 false ChrC: 79603-80102 Arabidopsis thaliana
ATCG00760 0.5kb downstream 0.5kb downstream 614 true ChrC: 78989-79602 Arabidopsis thaliana
ATCG00760 0.5kb downstream 0.5kb downstream 500 false ChrC: 78989-79488 Arabidopsis thaliana
ATCG00760 1.0kb upstream 1.0kb upstream 1114 true ChrC: 79489-80602 Arabidopsis thaliana
ATCG00760 1.0kb upstream 1.0kb upstream 1000 false ChrC: 79603-80602 Arabidopsis thaliana
ATCG00760 1.0kb downstream 1.0kb downstream 1114 true ChrC: 78489-79602 Arabidopsis thaliana
ATCG00760 1.0kb downstream 1.0kb downstream 1000 false ChrC: 78489-79488 Arabidopsis thaliana
ATCG00760 2.0kb upstream 2.0kb upstream 2114 true ChrC: 79489-81602 Arabidopsis thaliana
ATCG00760 2.0kb upstream 2.0kb upstream 2000 false ChrC: 79603-81602 Arabidopsis thaliana
ATCG00760 2.0kb downstream 2.0kb downstream 2114 true ChrC: 77489-79602 Arabidopsis thaliana
ATCG00760 2.0kb downstream 2.0kb downstream 2000 false ChrC: 77489-79488 Arabidopsis thaliana
ATCG00760 5.0kb upstream 5.0kb upstream 5114 true ChrC: 79489-84602 Arabidopsis thaliana
ATCG00760 5.0kb upstream 5.0kb upstream 5000 false ChrC: 79603-84602 Arabidopsis thaliana
ATCG00760 5.0kb downstream 5.0kb downstream 5114 true ChrC: 74489-79602 Arabidopsis thaliana
ATCG00760 5.0kb downstream 5.0kb downstream 5000 false ChrC: 74489-79488 Arabidopsis thaliana
ATCG00760 10.0kb upstream 10.0kb upstream 10114 true ChrC: 79489-89602 Arabidopsis thaliana
ATCG00760 10.0kb upstream 10.0kb upstream 10000 false ChrC: 79603-89602 Arabidopsis thaliana
ATCG00760 10.0kb downstream 10.0kb downstream 10114 true ChrC: 69489-79602 Arabidopsis thaliana
ATCG00760 10.0kb downstream 10.0kb downstream 10000 false ChrC: 69489-79488 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027899 5273 Angiosperm View MSA
122331539 5261 Brassicaceae Singleton cluster - no MSA
123837378 5264 Brassicales-Malvales View MSA
124322297 5266 SBM View MSA
124248149 5268 Malvidae View MSA
123952228 5270 Rosid View MSA
123646839 5271 Pentapetalae View MSA
122796462 5272 Eudicot View MSA
121350800 5274 Embryophyte View MSA
123426663 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.054        
cufflinks 5.693        
cufflinks 28.472     High High
cufflinks 5.586        
cufflinks 6.214        
cufflinks 11.645        

0 Strain