Gene : ATCG00820 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11880//PTHR11880:SF9 - RIBOSOMAL PROTEIN S19P FAMILY MEMBER // RIBOSOMAL PROTEIN S19, MITOCHONDRIAL Genomic Order:  61
Name:  ? ATCG00820 Secondary Identifier:  ? PAC:19637961
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00820 0.5kb upstream 0.5kb upstream 779 true ChrC: 84005-84783 Arabidopsis thaliana
ATCG00820 0.5kb upstream 0.5kb upstream 500 false ChrC: 84284-84783 Arabidopsis thaliana
ATCG00820 0.5kb downstream 0.5kb downstream 779 true ChrC: 83505-84283 Arabidopsis thaliana
ATCG00820 0.5kb downstream 0.5kb downstream 500 false ChrC: 83505-84004 Arabidopsis thaliana
ATCG00820 1.0kb upstream 1.0kb upstream 1279 true ChrC: 84005-85283 Arabidopsis thaliana
ATCG00820 1.0kb upstream 1.0kb upstream 1000 false ChrC: 84284-85283 Arabidopsis thaliana
ATCG00820 1.0kb downstream 1.0kb downstream 1279 true ChrC: 83005-84283 Arabidopsis thaliana
ATCG00820 1.0kb downstream 1.0kb downstream 1000 false ChrC: 83005-84004 Arabidopsis thaliana
ATCG00820 2.0kb upstream 2.0kb upstream 2279 true ChrC: 84005-86283 Arabidopsis thaliana
ATCG00820 2.0kb upstream 2.0kb upstream 2000 false ChrC: 84284-86283 Arabidopsis thaliana
ATCG00820 2.0kb downstream 2.0kb downstream 2279 true ChrC: 82005-84283 Arabidopsis thaliana
ATCG00820 2.0kb downstream 2.0kb downstream 2000 false ChrC: 82005-84004 Arabidopsis thaliana
ATCG00820 5.0kb upstream 5.0kb upstream 5279 true ChrC: 84005-89283 Arabidopsis thaliana
ATCG00820 5.0kb upstream 5.0kb upstream 5000 false ChrC: 84284-89283 Arabidopsis thaliana
ATCG00820 5.0kb downstream 5.0kb downstream 5279 true ChrC: 79005-84283 Arabidopsis thaliana
ATCG00820 5.0kb downstream 5.0kb downstream 5000 false ChrC: 79005-84004 Arabidopsis thaliana
ATCG00820 10.0kb upstream 10.0kb upstream 10279 true ChrC: 84005-94283 Arabidopsis thaliana
ATCG00820 10.0kb upstream 10.0kb upstream 10000 false ChrC: 84284-94283 Arabidopsis thaliana
ATCG00820 10.0kb downstream 10.0kb downstream 10279 true ChrC: 74005-84283 Arabidopsis thaliana
ATCG00820 10.0kb downstream 10.0kb downstream 10000 false ChrC: 74005-84004 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028835 5273 Angiosperm View MSA
122331522 5261 Brassicaceae Singleton cluster - no MSA
123837464 5264 Brassicales-Malvales View MSA
124322312 5266 SBM View MSA
124248164 5268 Malvidae View MSA
124071267 5270 Rosid View MSA
123749976 5271 Pentapetalae View MSA
122796059 5272 Eudicot View MSA
121349820 5274 Embryophyte View MSA
123426657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.649        
cufflinks 1.093        
cufflinks 6.428       High
cufflinks 1.057        
cufflinks 1.525        
cufflinks 2.224        

0 Strain