Gene : ATCG00840 A. thaliana TAIR10
Defline:  (1 of 3) K02892 - large subunit ribosomal protein L23 (RP-L23, MRPL23, rplW) Genomic Order:  63
Name:  ? ATCG00840 Secondary Identifier:  ? PAC:19638005
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00840 0.5kb upstream 0.5kb upstream 782 true ChrC: 85862-86643 Arabidopsis thaliana
ATCG00840 0.5kb upstream 0.5kb upstream 500 false ChrC: 86144-86643 Arabidopsis thaliana
ATCG00840 0.5kb downstream 0.5kb downstream 782 true ChrC: 85362-86143 Arabidopsis thaliana
ATCG00840 0.5kb downstream 0.5kb downstream 500 false ChrC: 85362-85861 Arabidopsis thaliana
ATCG00840 1.0kb upstream 1.0kb upstream 1282 true ChrC: 85862-87143 Arabidopsis thaliana
ATCG00840 1.0kb upstream 1.0kb upstream 1000 false ChrC: 86144-87143 Arabidopsis thaliana
ATCG00840 1.0kb downstream 1.0kb downstream 1282 true ChrC: 84862-86143 Arabidopsis thaliana
ATCG00840 1.0kb downstream 1.0kb downstream 1000 false ChrC: 84862-85861 Arabidopsis thaliana
ATCG00840 2.0kb upstream 2.0kb upstream 2282 true ChrC: 85862-88143 Arabidopsis thaliana
ATCG00840 2.0kb upstream 2.0kb upstream 2000 false ChrC: 86144-88143 Arabidopsis thaliana
ATCG00840 2.0kb downstream 2.0kb downstream 2282 true ChrC: 83862-86143 Arabidopsis thaliana
ATCG00840 2.0kb downstream 2.0kb downstream 2000 false ChrC: 83862-85861 Arabidopsis thaliana
ATCG00840 5.0kb upstream 5.0kb upstream 5282 true ChrC: 85862-91143 Arabidopsis thaliana
ATCG00840 5.0kb upstream 5.0kb upstream 5000 false ChrC: 86144-91143 Arabidopsis thaliana
ATCG00840 5.0kb downstream 5.0kb downstream 5282 true ChrC: 80862-86143 Arabidopsis thaliana
ATCG00840 5.0kb downstream 5.0kb downstream 5000 false ChrC: 80862-85861 Arabidopsis thaliana
ATCG00840 10.0kb upstream 10.0kb upstream 10282 true ChrC: 85862-96143 Arabidopsis thaliana
ATCG00840 10.0kb upstream 10.0kb upstream 10000 false ChrC: 86144-96143 Arabidopsis thaliana
ATCG00840 10.0kb downstream 10.0kb downstream 10282 true ChrC: 75862-86143 Arabidopsis thaliana
ATCG00840 10.0kb downstream 10.0kb downstream 10000 false ChrC: 75862-85861 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028381 5273 Angiosperm View MSA
122332224 5261 Brassicaceae View MSA
123837379 5264 Brassicales-Malvales View MSA
124346990 5266 SBM View MSA
124254667 5268 Malvidae View MSA
124061665 5270 Rosid View MSA
123748929 5271 Pentapetalae View MSA
122772902 5272 Eudicot View MSA
121297880 5274 Embryophyte View MSA
123335894 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain