Gene : ATCG00210 A. thaliana TAIR10
Defline:  (1 of 1) PTHR35773//PTHR35773:SF1 - FAMILY NOT NAMED // CYTOCHROME B6-F COMPLEX SUBUNIT 8 Genomic Order:  14
Name:  ? ATCG00210 Secondary Identifier:  ? PAC:19637956
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00210 0.5kb upstream 0.5kb upstream 590 true ChrC: 27589-28178 Arabidopsis thaliana
ATCG00210 0.5kb upstream 0.5kb upstream 500 false ChrC: 27589-28088 Arabidopsis thaliana
ATCG00210 0.5kb downstream 0.5kb downstream 590 true ChrC: 28089-28678 Arabidopsis thaliana
ATCG00210 0.5kb downstream 0.5kb downstream 500 false ChrC: 28179-28678 Arabidopsis thaliana
ATCG00210 1.0kb upstream 1.0kb upstream 1090 true ChrC: 27089-28178 Arabidopsis thaliana
ATCG00210 1.0kb upstream 1.0kb upstream 1000 false ChrC: 27089-28088 Arabidopsis thaliana
ATCG00210 1.0kb downstream 1.0kb downstream 1090 true ChrC: 28089-29178 Arabidopsis thaliana
ATCG00210 1.0kb downstream 1.0kb downstream 1000 false ChrC: 28179-29178 Arabidopsis thaliana
ATCG00210 2.0kb upstream 2.0kb upstream 2090 true ChrC: 26089-28178 Arabidopsis thaliana
ATCG00210 2.0kb upstream 2.0kb upstream 2000 false ChrC: 26089-28088 Arabidopsis thaliana
ATCG00210 2.0kb downstream 2.0kb downstream 2090 true ChrC: 28089-30178 Arabidopsis thaliana
ATCG00210 2.0kb downstream 2.0kb downstream 2000 false ChrC: 28179-30178 Arabidopsis thaliana
ATCG00210 5.0kb upstream 5.0kb upstream 5090 true ChrC: 23089-28178 Arabidopsis thaliana
ATCG00210 5.0kb upstream 5.0kb upstream 5000 false ChrC: 23089-28088 Arabidopsis thaliana
ATCG00210 5.0kb downstream 5.0kb downstream 5090 true ChrC: 28089-33178 Arabidopsis thaliana
ATCG00210 5.0kb downstream 5.0kb downstream 5000 false ChrC: 28179-33178 Arabidopsis thaliana
ATCG00210 10.0kb upstream 10.0kb upstream 10090 true ChrC: 18089-28178 Arabidopsis thaliana
ATCG00210 10.0kb upstream 10.0kb upstream 10000 false ChrC: 18089-28088 Arabidopsis thaliana
ATCG00210 10.0kb downstream 10.0kb downstream 10090 true ChrC: 28089-38178 Arabidopsis thaliana
ATCG00210 10.0kb downstream 10.0kb downstream 10000 false ChrC: 28179-38178 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495475 5273 Angiosperm Singleton cluster - no MSA
122331521 5261 Brassicaceae Singleton cluster - no MSA
123772703 5264 Brassicales-Malvales Singleton cluster - no MSA
124271211 5266 SBM Singleton cluster - no MSA
124127223 5268 Malvidae Singleton cluster - no MSA
123856092 5270 Rosid Singleton cluster - no MSA
123442041 5271 Pentapetalae Singleton cluster - no MSA
122477622 5272 Eudicot Singleton cluster - no MSA
120768840 5274 Embryophyte Singleton cluster - no MSA
122811222 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.619        
cufflinks 1.687        
cufflinks 47.809     High High
cufflinks 1.293        
cufflinks 7.344        
cufflinks 0.7       Low

0 Strain